RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 TRIM43Q96BQ3 446 aaPredicted RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 MROH8Q9H579 483 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 BDP1A6H8Y1 2624 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 GOLIM4O00461 696 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 AKR1B1P15121 316 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 TLE2Q04725 743 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 MYLIPQ8WY64 445 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 TTYH1Q9H313 450 aaPredicted RBP13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 TCRBV5S4A2TA0A5A2 114 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 SMIM22K7EJ46 135 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 APBB1O00213 710 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 ICA1Q05084 483 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 ABRAQ8N0Z2 381 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
PTP4A2-206ENST00000489313 PRKAB2O43741 272 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 PGK2P07205 417 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 FCER1AP12319 257 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 ITGB8P26012 769 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 TMEM132BQ14DG7 1078 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 ARHGEF10LQ9HCE6 1279 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 TRANK1O15050 2925 aa13.05□□□□□ -0.32
PTP4A2-206ENST00000489313 CYP2D7A0A087X1C5 515 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 PGK1P00558 417 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 EPHB4P54760 987 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 SMAD3P84022 425 aaKnown RBP13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 MMP19Q99542 508 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
PTP4A2-206ENST00000489313 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 MBD4O95243 580 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 RARBP10826 455 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 C1orf53Q5VUE5 145 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 PANK1Q8TE04 598 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 MYH7P12883 1935 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 PQBP1O60828 265 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 SLC25A27O95847 323 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 CHGBP05060 677 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 CLTBP09497 229 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 FOSL2P15408 326 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 CDK8P49336 464 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
PTP4A2-206ENST00000489313 A0A1W2PQ45 241 aaPredicted RBP13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 A0A1W2PQY0 241 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 RAD21O60216 631 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 IFIT2P09913 472 aaKnown RBP13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 C12orf60Q5U649 245 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 RNF180Q86T96 592 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 XIRP2A4UGR9 3374 aa13.02□□□□□ -0.33
PTP4A2-206ENST00000489313 USP17L12C9JPN9 530 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 USP17L21D6R901 530 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 VWA5AO00534 786 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 RAG1P15918 1043 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 ADD2P35612 726 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 STAT3P40763 770 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 KCTD2Q14681 263 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 BOLA2Q9H3K6 86 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 PAG1Q9NWQ8 432 aa13.01□□□□□ -0.33
PTP4A2-206ENST00000489313 MCM3APO60318 1980 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 KIAA0355O15063 1070 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 FAM83BQ5T0W9 1011 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 C16orf86Q6ZW13 317 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 TMEM39AQ9NV64 488 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
PTP4A2-206ENST00000489313 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
PTP4A2-206ENST00000489313 ADAMTS4O75173 837 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms