RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
ITSN1-231ENST00000489261 SERPINB13Q9UIV8 391 aa12.42□□□□□ -0.42
ITSN1-231ENST00000489261 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
ITSN1-231ENST00000489261 IGKV6D-41A0A0C4DH26 115 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 GOLGA6L6A8MZA4 724 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
ITSN1-231ENST00000489261 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 FZD9O00144 591 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 ADCY5O95622 1261 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
ITSN1-231ENST00000489261 NR5A1Q13285 461 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
ITSN1-231ENST00000489261 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 MTMR4Q9NYA4 1195 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
ITSN1-231ENST00000489261 KCNH3Q9ULD8 1083 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 PCDHA4Q9UN74 947 aa12.41□□□□□ -0.42
ITSN1-231ENST00000489261 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 SMTNL1A8MU46 457 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 KLRF2D3W0D1 207 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
ITSN1-231ENST00000489261 PTMAP06454 111 aaKnown RBP12.4□□□□□ -0.42
ITSN1-231ENST00000489261 MSNP26038 577 aaKnown RBP12.4□□□□□ -0.42
ITSN1-231ENST00000489261 CLCN1P35523 988 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 MMP14P50281 582 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 NLRP12P59046 1061 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 FSTL1Q12841 308 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 ASPRV1Q53RT3 343 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
ITSN1-231ENST00000489261 DBNDD1Q9H9R9 158 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
ITSN1-231ENST00000489261 BECN2A8MW95 431 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 ENTPD3O75355 529 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 TTLL1O95922 423 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 GNA11P29992 359 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 TPM4P67936 248 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 PICALMQ13492 652 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 IQCB1Q15051 598 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 NPY5RQ15761 445 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
ITSN1-231ENST00000489261 TTC38Q5R3I4 469 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
ITSN1-231ENST00000489261 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 KRBA2Q6ZNG9 492 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 CNNM3Q8NE01 707 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 RRP36Q96EU6 259 aaKnown RBP12.39□□□□□ -0.43
ITSN1-231ENST00000489261 CEP95Q96GE4 821 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 BARHL2Q9NY43 387 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 TUBE1Q9UJT0 475 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
ITSN1-231ENST00000489261 PSME4Q14997 1843 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
ITSN1-231ENST00000489261 ESYT2A0FGR8 921 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 MYO1BO43795 1136 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SCNN1DP51172 638 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 ORC2Q13416 577 aaPredicted RBP12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SMC1BQ8NDV3 1235 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 MKL1Q969V6 931 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SHISA4Q96DD7 197 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 C6orf50Q9HD87 102 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 DDX4Q9NQI0 724 aaKnown RBP12.38□□□□□ -0.43
ITSN1-231ENST00000489261 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
ITSN1-231ENST00000489261 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 MYH1P12882 1939 aa12.38□□□□□ -0.43
ITSN1-231ENST00000489261 MYH6P13533 1939 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 CCDC194A0A1B0GVG4 234 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 LAD1O00515 517 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 CDC25BP30305 580 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
ITSN1-231ENST00000489261 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
ITSN1-231ENST00000489261 GPATCH4Q5T3I0 446 aaKnown RBP12.37□□□□□ -0.43
ITSN1-231ENST00000489261 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
ITSN1-231ENST00000489261 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 TRIML1Q8N9V2 468 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 CLIC6Q96NY7 704 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 CDK5RAP2Q96SN8 1893 aa12.37□□□□□ -0.43
ITSN1-231ENST00000489261 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
ITSN1-231ENST00000489261 hCG_1642624A0A1W2PR95 340 aa12.36□□□□□ -0.43
ITSN1-231ENST00000489261 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms