RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.03
TOP3A-206ENST00000489131 AIFM3Q96NN9 605 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 WDR18Q9BV38 432 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 PHF20Q9BVI0 1012 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 KIAA1683Q9H0B3 1180 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 GOPCQ9HD26 462 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 SCAF8Q9UPN6 1271 aaKnown RBP14.84□□□□□ -0.03
TOP3A-206ENST00000489131 PHIPQ8WWQ0 1821 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 UBE2Q2LH0YL09 131 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 NDUFB10O96000 172 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 TRIM29Q14134 588 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 RASGRP2Q7LDG7 609 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 KRT26Q7Z3Y9 468 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 USP48Q86UV5 1035 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 SHISA4Q96DD7 197 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 FOXP1Q9H334 677 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-206ENST00000489131 VCPKMTQ9H867 229 aa14.83□□□□□ -0.04
TOP3A-206ENST00000489131 OTOFQ9HC10 1997 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 GOLGA8HP0CJ92 632 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 SLC1A4P43007 532 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 NPY5RQ15761 445 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 GALNT17Q6IS24 598 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 CCDC82Q8N4S0 544 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 LPAR1Q92633 364 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
TOP3A-206ENST00000489131 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
TOP3A-206ENST00000489131 ESYT2A0FGR8 921 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 UNCXA6NJT0 531 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 ADM5C9JUS6 153 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 USP2O75604 605 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-206ENST00000489131 INPP5BP32019 993 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 ECE1P42892 770 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 TEX2Q8IWB9 1127 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 WRNIP1Q96S55 665 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 ELP1O95163 1332 aa14.81□□□□□ -0.04
TOP3A-206ENST00000489131 BMP3P12645 472 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 VEGFAP15692 232 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-206ENST00000489131 PTPRAP18433 802 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 CALML3P27482 149 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 SAFBQ15424 915 aaKnown RBP eCLIP14.8□□□□□ -0.04
TOP3A-206ENST00000489131 FOXD4L5Q5VV16 416 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-206ENST00000489131 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 FERMT3Q86UX7 667 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 CCDC148Q8NFR7 591 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 FOXD4L4Q8WXT5 416 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-206ENST00000489131 TNFRSF25Q93038 417 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 CDCA5Q96FF9 252 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 C12orf42Q96LP6 360 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 JMJD4Q9H9V9 463 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 AS3MTQ9HBK9 375 aa14.8□□□□□ -0.04
TOP3A-206ENST00000489131 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-206ENST00000489131 PNMA6FA0A0J9YX94 578 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 KIF28PB7ZC32 967 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 M0R2N6 131 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 STXBP3O00186 592 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 USP14P54578 494 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 KRT85P78386 507 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 GUCY1B3Q02153 619 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 CSPP1Q1MSJ5 1256 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 CCDC96Q2M329 555 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 KIAA1755Q5JYT7 1200 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 PRAMEF18Q5VWM3 479 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 WWC2Q6AWC2 1192 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 DIS3L2Q8IYB7 885 aaKnown RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 ADGRF4Q8IZF3 695 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 CCDC12Q8WUD4 166 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 SCAND2PQ9GZW5 306 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 ZMYND12Q9H0C1 365 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 PICK1Q9NRD5 415 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 VPS54Q9P1Q0 977 aa14.79□□□□□ -0.04
TOP3A-206ENST00000489131 SEC63Q9UGP8 760 aaKnown RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 MORC2Q9Y6X9 1032 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-206ENST00000489131 TCHHQ07283 1943 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 ZBTB5O15062 677 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
TOP3A-206ENST00000489131 NF2P35240 595 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 MYSM1Q5VVJ2 828 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 TTBK2Q6IQ55 1244 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-206ENST00000489131 KCTD1Q719H9 257 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 FAM160B2Q86V87 743 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 PIGSQ96S52 555 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 GLIS2Q9BZE0 524 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-206ENST00000489131 UBA5Q9GZZ9 404 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 LMBRD1Q9NUN5 540 aa14.78□□□□□ -0.04
TOP3A-206ENST00000489131 CFAP45Q9UL16 551 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms