RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 RARBP10826 455 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
YIPF3-207ENST00000488966 TAL1P17542 331 aaPredicted RBP13.01□□□□□ -0.33
YIPF3-207ENST00000488966 CDK8P49336 464 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 EPHB4P54760 987 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
YIPF3-207ENST00000488966 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 MMP19Q99542 508 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 NRBP1Q9UHY1 535 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 RLFQ13129 1914 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 A0A0G2JMZ2 1700 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 USP17L12C9JPN9 530 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 USP17L21D6R901 530 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 IFIT2P09913 472 aaKnown RBP13□□□□□ -0.33
YIPF3-207ENST00000488966 ADD2P35612 726 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
YIPF3-207ENST00000488966 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 TINF2Q9BSI4 451 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
YIPF3-207ENST00000488966 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 A0A1W2PQ45 241 aaPredicted RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 A0A1W2PQY0 241 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 VWA5AO00534 786 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 KIAA0355O15063 1070 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 CLTBP09497 229 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 ZNF865P0CJ78 1059 aaPredicted RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 RNF180Q86T96 592 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 RNPC3Q96LT9 517 aaKnown RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
YIPF3-207ENST00000488966 DIS3Q9Y2L1 958 aaKnown RBP12.99□□□□□ -0.33
YIPF3-207ENST00000488966 FOSL2P15408 326 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 RAG1P15918 1043 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 STAT3P40763 770 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
YIPF3-207ENST00000488966 KCTD2Q14681 263 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
YIPF3-207ENST00000488966 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
YIPF3-207ENST00000488966 LAMA2P24043 3122 aaKnown RBP12.97□□□□□ -0.33
YIPF3-207ENST00000488966 RAD21O60216 631 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 ADAMTS4O75173 837 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 AKR1A1P14550 325 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 FAM83BQ5T0W9 1011 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
YIPF3-207ENST00000488966 HAUS7Q99871 368 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
YIPF3-207ENST00000488966 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
YIPF3-207ENST00000488966 ROBO3Q96MS0 1386 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 ATP5JP18859 108 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 FPGSQ05932 587 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 UBE3CQ15386 1083 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
YIPF3-207ENST00000488966 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 TSEN34Q9BSV6 310 aaKnown RBP12.96□□□□□ -0.33
YIPF3-207ENST00000488966 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 RIPK3Q9Y572 518 aa12.96□□□□□ -0.33
YIPF3-207ENST00000488966 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 HMMRO75330 724 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 SNAI1O95863 264 aaPredicted RBP12.95□□□□□ -0.34
YIPF3-207ENST00000488966 COPB2P35606 906 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 ACLYP53396 1101 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 GRIN2CQ14957 1233 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 SLF1Q9BQI6 1058 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
YIPF3-207ENST00000488966 STARD7Q9NQZ5 370 aa12.95□□□□□ -0.34
YIPF3-207ENST00000488966 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 DCDC2CA8MYV0 355 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 DNAJB2P25686 324 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-207ENST00000488966 KCNA10Q16322 511 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
YIPF3-207ENST00000488966 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms