RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PRDM1O75626 825 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 HOXC6P09630 235 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 NUCB1Q02818 461 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 TRIM32Q13049 653 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 PLS1Q14651 629 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 MFSD14CQ5VZR4 134 aa16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
SPTLC1-207ENST00000488921 LAMA4Q16363 1823 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 SLC25A27O95847 323 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 TTLL1O95922 423 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 ERCC3P19447 782 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 COPB2P35606 906 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 CCL14Q16627 93 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 CEP95Q96GE4 821 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 SLC5A4Q9NY91 659 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 ALPK3Q96L96 1907 aa16.41■□□□□ 0.22
SPTLC1-207ENST00000488921 F5H6K3 240 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 IGHDP01880 384 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 KLRC3Q07444 240 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 CACNB2Q08289 660 aaPredicted RBP16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 MCMDC2Q4G0Z9 681 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 NECAB2Q7Z6G3 386 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 DPP9Q86TI2 863 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 ABRAQ8N0Z2 381 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 NEDD1Q8NHV4 660 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 DPF3Q92784 378 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 MKL1Q969V6 931 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
SPTLC1-207ENST00000488921 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 NDUFB10O96000 172 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 ADORA2AP29274 412 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 ALX1Q15699 326 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 OGDHLQ9ULD0 1010 aa16.39■□□□□ 0.21
SPTLC1-207ENST00000488921 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 VWA5AO00534 786 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 FOXP2O15409 715 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 FCER1AP12319 257 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 TFAP4Q01664 338 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 OLFML2BQ68BL8 750 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 FAM227BQ96M60 508 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 NR2E3Q9Y5X4 410 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
SPTLC1-207ENST00000488921 HIP1O00291 1037 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 MSCO60682 206 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 NPLOC4Q8TAT6 608 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
SPTLC1-207ENST00000488921 STAT3P40763 770 aa16.36■□□□□ 0.21
SPTLC1-207ENST00000488921 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
SPTLC1-207ENST00000488921 MMP19Q99542 508 aa16.36■□□□□ 0.21
SPTLC1-207ENST00000488921 TEX13BQ9BXU2 312 aa16.36■□□□□ 0.21
SPTLC1-207ENST00000488921 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
SPTLC1-207ENST00000488921 H0YGN5 161 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 ORC4O43929 436 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 EVI5O60447 810 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 ZBED4O75132 1171 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 FGAP02671 866 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 FDX1P10109 184 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 HSPD1P10809 573 aaKnown RBP16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 BMP3P12645 472 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 SDSP20132 328 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 KCTD2Q14681 263 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 C11orf49Q9H6J7 331 aa16.35■□□□□ 0.21
SPTLC1-207ENST00000488921 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms