RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 CASP8AP2Q9UKL3 1982 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 TNKSO95271 1327 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 CNMDO75829 334 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 DSG3P32926 999 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 ANTXR2P58335 489 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
SMKR1-202ENST00000488846 COL9A3Q14050 684 aaPredicted RBP10.43□□□□□ -0.74
SMKR1-202ENST00000488846 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 LRRC47Q8N1G4 583 aaKnown RBP10.43□□□□□ -0.74
SMKR1-202ENST00000488846 IGDCC4Q8TDY8 1250 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 SMCR8Q8TEV9 937 aaPredicted RBP10.43□□□□□ -0.74
SMKR1-202ENST00000488846 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 ZKSCAN3Q9BRR0 538 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 TXNRD2Q9NNW7 524 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 CPA4Q9UI42 421 aa10.43□□□□□ -0.74
SMKR1-202ENST00000488846 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 EIF5BO60841 1220 aaKnown RBP10.42□□□□□ -0.74
SMKR1-202ENST00000488846 GNRH1P01148 92 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 PDHBP11177 359 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 BMP3P12645 472 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 CTGFP29279 349 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 EXOSC10Q01780 885 aaKnown RBP10.42□□□□□ -0.74
SMKR1-202ENST00000488846 KRT32Q14532 448 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 C8orf34Q49A92 452 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 BTNL9Q6UXG8 535 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
SMKR1-202ENST00000488846 ANKRD13CQ8N6S4 541 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 REPS2Q8NFH8 660 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 FEM1BQ9UK73 627 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 PPP1R9AQ9ULJ8 1098 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 SNX14Q9Y5W7 946 aa10.42□□□□□ -0.74
SMKR1-202ENST00000488846 CENPFP49454 3210 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 ATP2A1O14983 1001 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 FLOT1O75955 427 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 ZKSCAN1P17029 563 aaPredicted RBP10.41□□□□□ -0.74
SMKR1-202ENST00000488846 MCCP23508 829 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 MCM5P33992 734 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 SLC1A4P43007 532 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 ERVK-24P63145 666 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 Q3C1V9 767 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 ADCK5Q3MIX3 580 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 CTU1Q7Z7A3 348 aaKnown RBP10.41□□□□□ -0.74
SMKR1-202ENST00000488846 FBXL16Q8N461 479 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
SMKR1-202ENST00000488846 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 NEK1Q96PY6 1258 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 NUP88Q99567 741 aaPredicted RBP10.41□□□□□ -0.74
SMKR1-202ENST00000488846 SLF1Q9BQI6 1058 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 FBXO28Q9NVF7 368 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
SMKR1-202ENST00000488846 VWA5AO00534 786 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 PRC1O43663 620 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 FDX1P10109 184 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 LIFRP42702 1097 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 STAT2P52630 851 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 ZNF543Q08ER8 600 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 PKN2Q16513 984 aaKnown RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 IFIT1BQ5T764 474 aaKnown RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 COL13A1Q5TAT6 717 aaPredicted RBP10.4□□□□□ -0.74
SMKR1-202ENST00000488846 RASGRP2Q7LDG7 609 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 OTOP1Q7RTM1 612 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 GPRC5AQ8NFJ5 357 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 CHURC1Q8WUH1 139 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 ATG4CQ96DT6 458 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 ARHGAP39Q9C0H5 1083 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 KAT14Q9H8E8 782 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 SENP2Q9HC62 589 aa10.4□□□□□ -0.74
SMKR1-202ENST00000488846 MGAMO43451 1857 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
SMKR1-202ENST00000488846 PEX10O60683 326 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 SEC24BO95487 1268 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 PSMC4P43686 418 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 PRMT2P55345 433 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 ANAPC15P60006 121 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 TROAPQ12815 778 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 KIF22Q14807 665 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 TMEM132BQ14DG7 1078 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 ARHGEF6Q15052 776 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 GPATCH4Q5T3I0 446 aaKnown RBP10.39□□□□□ -0.75
SMKR1-202ENST00000488846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMKR1-202ENST00000488846 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
SMKR1-202ENST00000488846 CHST3Q7LGC8 479 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
SMKR1-202ENST00000488846 TMTC2Q8N394 836 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms