RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 SYN1P17600 705 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 PLS1Q14651 629 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 FAM83BQ5T0W9 1011 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 SHCBP1Q8NEM2 672 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 TTC41PQ6P2S7 1318 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 FRMPD3Q5JV73 1810 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 ZNF236Q9UL36 1845 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 RAD21O60216 631 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 MB21D1Q8N884 522 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 GDF15Q99988 308 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
PCYT1A-215ENST00000488235 COL11A1P12107 1806 aaPredicted RBP13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 VWA5AO00534 786 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 NDUFB10O96000 172 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 MX1P20591 662 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 CNGA1P29973 690 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 TDO2P48775 406 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 MROH8Q9H579 483 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 MKNK2Q9HBH9 465 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
PCYT1A-215ENST00000488235 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 F5H6K3 240 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 STRNO43815 780 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 APPP05067 770 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 PGK2P07205 417 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 KLRC3Q07444 240 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 OLFML2BQ68BL8 750 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 MAML3Q96JK9 1138 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 FSD1Q9BTV5 496 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 RIPK3Q9Y572 518 aa13.42□□□□□ -0.26
PCYT1A-215ENST00000488235 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 FAM47AQ5JRC9 791 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 ANKRD45Q5TZF3 282 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 RIOX2Q8IUF8 465 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
PCYT1A-215ENST00000488235 ERC2O15083 957 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 FCER1AP12319 257 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 GNAT2P19087 354 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 STAT3P40763 770 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 GJC2Q5T442 439 aaPredicted RBP13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 ABRAQ8N0Z2 381 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 MMP19Q99542 508 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 SLF1Q9BQI6 1058 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 SENP6Q9GZR1 1112 aaPredicted RBP13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 MTMR4Q9NYA4 1195 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 VCANP13611 3396 aa13.4□□□□□ -0.26
PCYT1A-215ENST00000488235 SLC25A27O95847 323 aa13.39□□□□□ -0.27
PCYT1A-215ENST00000488235 PPARAQ07869 468 aa13.39□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF792Q3KQV3 632 aa13.39□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
PCYT1A-215ENST00000488235 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
PCYT1A-215ENST00000488235 PLIN4Q96Q06 1357 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 DNM1LO00429 736 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 SEPT4O43236 478 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 BMP8BP34820 402 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 PDE1AP54750 535 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 CTDSPL2Q05D32 466 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 SNRNP48Q6IEG0 339 aaKnown RBP13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 NEDD1Q8NHV4 660 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 MKL1Q969V6 931 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 FAM227BQ96M60 508 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 NAPBQ9H115 298 aa13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNFX1Q9P2E3 1918 aaKnown RBP13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 NMT2O60551 498 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms