RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SYNPO2Q9UMS6 1093 aa12.98□□□□□ -0.33
UBE4B-210ENST00000488228 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
UBE4B-210ENST00000488228 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 SH2B2O14492 632 aaPredicted RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 TLR2O60603 784 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 MCM5P33992 734 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 KRT32Q14532 448 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 TMEM67Q5HYA8 995 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
UBE4B-210ENST00000488228 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
UBE4B-210ENST00000488228 PLXNA1Q9UIW2 1896 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ERICH2A1L162 156 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 GPR25O00155 361 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 PDHBP11177 359 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 BCRP11274 1271 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 BMP3P12645 472 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
UBE4B-210ENST00000488228 SLC1A4P43007 532 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 WTAPQ15007 396 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.33
UBE4B-210ENST00000488228 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ANKRD13CQ8N6S4 541 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ATG4CQ96DT6 458 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 GMCL1Q96IK5 515 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 TTC14Q96N46 770 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 LY9Q9HBG7 655 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 TXNRD2Q9NNW7 524 aa12.96□□□□□ -0.33
UBE4B-210ENST00000488228 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 CAP1Q01518 475 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 SLF1Q9BQI6 1058 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
UBE4B-210ENST00000488228 PPP1R9AQ9ULJ8 1098 aa12.95□□□□□ -0.34
UBE4B-210ENST00000488228 ZNFX1Q9P2E3 1918 aaKnown RBP12.95□□□□□ -0.34
UBE4B-210ENST00000488228 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 LCTP09848 1927 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 TMEM232C9JQI7 657 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 FKTNO75072 461 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 CNMDO75829 334 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 GOLGA8HP0CJ92 632 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
UBE4B-210ENST00000488228 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
UBE4B-210ENST00000488228 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
UBE4B-210ENST00000488228 CD99L2Q8TCZ2 262 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
UBE4B-210ENST00000488228 MYPNQ86TC9 1320 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 EIF5BO60841 1220 aaKnown RBP12.93□□□□□ -0.34
UBE4B-210ENST00000488228 RXRAP19793 462 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 CTGFP29279 349 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 DSG3P32926 999 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 SLC16A2P36021 539 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 STAT2P52630 851 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
UBE4B-210ENST00000488228 SP3Q02447 781 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 COG2Q14746 738 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 FAM110CQ1W6H9 321 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
UBE4B-210ENST00000488228 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 RBPJLQ9UBG7 517 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 MORF4L1Q9UBU8 362 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
UBE4B-210ENST00000488228 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
UBE4B-210ENST00000488228 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
UBE4B-210ENST00000488228 PSMA5P28066 241 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 SNAP25P60880 206 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 ERVK-24P63145 666 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
UBE4B-210ENST00000488228 GRM4Q14833 912 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 LBX2Q6XYB7 198 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 Q6ZUG5 572 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 GTF3C2Q8WUA4 911 aaPredicted RBP12.92□□□□□ -0.34
UBE4B-210ENST00000488228 NUP133Q8WUM0 1156 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms