RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 ADCK5Q3MIX3 580 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 COL13A1Q5TAT6 717 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 RCSD1Q6JBY9 416 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 DHX32Q7L7V1 743 aaKnown RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 TMTC2Q8N394 836 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 PNMA1Q8ND90 353 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 GTF3C2Q8WUA4 911 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 ZNF296Q8WUU4 475 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 DCAF4Q8WV16 495 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 ANKS1AQ92625 1134 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 TMEM87BQ96K49 555 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 NUP88Q99567 741 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 R3HDMLQ9H3Y0 253 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 CPA4Q9UI42 421 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 CTDP1Q9Y5B0 961 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-219ENST00000488186 ADGRA2Q96PE1 1338 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 MYH4Q9Y623 1939 aa18.43■□□□□ 0.54
C9orf3-219ENST00000488186 HERVK_113P62684 666 aa18.43■□□□□ 0.54
C9orf3-219ENST00000488186 C17orf99Q6UX52 265 aa18.43■□□□□ 0.54
C9orf3-219ENST00000488186 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
C9orf3-219ENST00000488186 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
C9orf3-219ENST00000488186 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
C9orf3-219ENST00000488186 ANTXR2P58335 489 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 SP3Q02447 781 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 KIF22Q14807 665 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 SEC23AQ15436 765 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 PKN2Q16513 984 aaKnown RBP18.42■□□□□ 0.54
C9orf3-219ENST00000488186 CATIPQ7Z7H3 387 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 IGDCC4Q8TDY8 1250 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 CHURC1Q8WUH1 139 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
C9orf3-219ENST00000488186 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 ARHGEF6Q15052 776 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 CCAR1Q8IX12 1150 aaKnown RBP18.41■□□□□ 0.54
C9orf3-219ENST00000488186 ANKRD13CQ8N6S4 541 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 ERO1AQ96HE7 468 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 PAGR1Q9BTK6 254 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
C9orf3-219ENST00000488186 GNRH1P01148 92 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 DSG3P32926 999 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 ANAPC15P60006 121 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 PRPF38AQ8NAV1 312 aaKnown RBP18.4■□□□□ 0.54
C9orf3-219ENST00000488186 KIFC2Q96AC6 838 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 SLF1Q9BQI6 1058 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
C9orf3-219ENST00000488186 SH2B2O14492 632 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 ZBED4O75132 1171 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 PDHBP11177 359 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 BCRP11274 1271 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 CPA1P15085 419 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 LIFRP42702 1097 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 STAT2P52630 851 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 CTU1Q7Z7A3 348 aaKnown RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 GPRC5AQ8NFJ5 357 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 NUP133Q8WUM0 1156 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 TCEANC2Q96MN5 208 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 FBXO28Q9NVF7 368 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
C9orf3-219ENST00000488186 FRMPD2Q68DX3 1309 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-219ENST00000488186 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-219ENST00000488186 PLS1Q14651 629 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
C9orf3-219ENST00000488186 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 ATG4CQ96DT6 458 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-219ENST00000488186 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
C9orf3-219ENST00000488186 ECM2O94769 699 aaPredicted RBP18.37■□□□□ 0.53
C9orf3-219ENST00000488186 CCNA1P78396 465 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 ZNF543Q08ER8 600 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 LBX2Q6XYB7 198 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 Q6ZUG5 572 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 SENP2Q9HC62 589 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 RBPJLQ9UBG7 517 aa18.37■□□□□ 0.53
C9orf3-219ENST00000488186 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
C9orf3-219ENST00000488186 PLA2G6O60733 806 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
C9orf3-219ENST00000488186 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 CALM1P0DP23 149 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms