RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 FCER1AP12319 257 aa20.41■□□□□ 0.86
ITSN1-230ENST00000488166 EEF2P13639 858 aaKnown RBP20.41■□□□□ 0.86
ITSN1-230ENST00000488166 GPR153Q6NV75 609 aa20.41■□□□□ 0.86
ITSN1-230ENST00000488166 PUS7LQ9H0K6 701 aaKnown RBP20.41■□□□□ 0.86
ITSN1-230ENST00000488166 KANSL2Q9H9L4 492 aa20.41■□□□□ 0.86
ITSN1-230ENST00000488166 GOPCQ9HD26 462 aa20.41■□□□□ 0.86
ITSN1-230ENST00000488166 SLC25A27O95847 323 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 LTBP2Q14767 1821 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 TMEM132BQ14DG7 1078 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 PRAMEF19Q5SWL8 479 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 CTR9Q6PD62 1173 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 Q7L0L9 218 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 STK11IPQ8N1F8 1099 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 ATP11BQ9Y2G3 1177 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 COL6A3P12111 3177 aa20.4■□□□□ 0.86
ITSN1-230ENST00000488166 SEPT4O43236 478 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 RTP1P59025 263 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 C20orf194Q5TEA3 1177 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 ABRAQ8N0Z2 381 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 MAML3Q96JK9 1138 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 MMP19Q99542 508 aa20.39■□□□□ 0.85
ITSN1-230ENST00000488166 ARPP21Q9UBL0 812 aaPredicted RBP20.39■□□□□ 0.85
ITSN1-230ENST00000488166 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.85
ITSN1-230ENST00000488166 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
ITSN1-230ENST00000488166 FBXO28Q9NVF7 368 aa20.38■□□□□ 0.85
ITSN1-230ENST00000488166 IGHA2P01877 340 aa20.37■□□□□ 0.85
ITSN1-230ENST00000488166 FAM83BQ5T0W9 1011 aa20.37■□□□□ 0.85
ITSN1-230ENST00000488166 GPATCH3Q96I76 525 aa20.37■□□□□ 0.85
ITSN1-230ENST00000488166 MKNK2Q9HBH9 465 aa20.37■□□□□ 0.85
ITSN1-230ENST00000488166 MINDY4BA8MYZ0 360 aa20.36■□□□□ 0.85
ITSN1-230ENST00000488166 KCTD2Q14681 263 aa20.36■□□□□ 0.85
ITSN1-230ENST00000488166 SLC39A5Q6ZMH5 540 aa20.36■□□□□ 0.85
ITSN1-230ENST00000488166 RIOX2Q8IUF8 465 aa20.36■□□□□ 0.85
ITSN1-230ENST00000488166 PRDM5Q9NQX1 630 aaPredicted RBP20.36■□□□□ 0.85
ITSN1-230ENST00000488166 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
ITSN1-230ENST00000488166 VWA5AO00534 786 aa20.35■□□□□ 0.85
ITSN1-230ENST00000488166 PGK2P07205 417 aa20.35■□□□□ 0.85
ITSN1-230ENST00000488166 STAT3P40763 770 aa20.35■□□□□ 0.85
ITSN1-230ENST00000488166 FERMT2Q96AC1 680 aa20.35■□□□□ 0.85
ITSN1-230ENST00000488166 STRBPQ96SI9 672 aaKnown RBP20.35■□□□□ 0.85
ITSN1-230ENST00000488166 ADAMTS5Q9UNA0 930 aa20.35■□□□□ 0.85
ITSN1-230ENST00000488166 ADCYAP1R1P41586 468 aa20.34■□□□□ 0.85
ITSN1-230ENST00000488166 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
ITSN1-230ENST00000488166 LRRC41Q15345 812 aa20.34■□□□□ 0.85
ITSN1-230ENST00000488166 FAM47AQ5JRC9 791 aa20.34■□□□□ 0.85
ITSN1-230ENST00000488166 KBTBD3Q8NAB2 608 aa20.34■□□□□ 0.85
ITSN1-230ENST00000488166 DLL1O00548 723 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 APPP05067 770 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 RARBP10826 455 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 RASA1P20936 1047 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 COPB2P35606 906 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 SBK1Q52WX2 424 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 APPBP2Q92624 585 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
ITSN1-230ENST00000488166 XPNPEP3Q9NQH7 507 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 MTMR10Q9NXD2 777 aa20.33■□□□□ 0.85
ITSN1-230ENST00000488166 CTDP1Q9Y5B0 961 aaPredicted RBP20.33■□□□□ 0.85
ITSN1-230ENST00000488166 GSG1L2A8MUP6 293 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 TDO2P48775 406 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 GIMAP6Q6P9H5 292 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 TINF2Q9BSI4 451 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
ITSN1-230ENST00000488166 ZNF214Q9UL59 606 aaPredicted RBP20.32■□□□□ 0.84
ITSN1-230ENST00000488166 STXBP5LQ9Y2K9 1186 aa20.32■□□□□ 0.84
ITSN1-230ENST00000488166 RNF113AO15541 343 aaKnown RBP20.31■□□□□ 0.84
ITSN1-230ENST00000488166 GPAA1O43292 621 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 ZNF792Q3KQV3 632 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 RNF180Q86T96 592 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 ZNF444Q8N0Y2 327 aaPredicted RBP20.31■□□□□ 0.84
ITSN1-230ENST00000488166 NYAP2Q9P242 653 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 CLIP2Q9UDT6 1046 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 DIS3Q9Y2L1 958 aaKnown RBP20.31■□□□□ 0.84
ITSN1-230ENST00000488166 MCM3APO60318 1980 aa20.31■□□□□ 0.84
ITSN1-230ENST00000488166 F5H6K3 240 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 ZFYP08048 801 aaPredicted RBP20.3■□□□□ 0.84
ITSN1-230ENST00000488166 GNAT2P19087 354 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 KLRC3Q07444 240 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 SNRNP48Q6IEG0 339 aaKnown RBP20.3■□□□□ 0.84
ITSN1-230ENST00000488166 CPXCR1Q8N123 301 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 DCTPP1Q9H773 170 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 NRBP1Q9UHY1 535 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 CNPY2Q9Y2B0 182 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 ROBO3Q96MS0 1386 aa20.3■□□□□ 0.84
ITSN1-230ENST00000488166 NDUFB10O96000 172 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 PGK1P00558 417 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 AKR1A1P14550 325 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
ITSN1-230ENST00000488166 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
ITSN1-230ENST00000488166 PRPF38AQ8NAV1 312 aaKnown RBP20.29■□□□□ 0.84
ITSN1-230ENST00000488166 REPS2Q8NFH8 660 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 BADQ92934 168 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 FAM161BQ96MY7 647 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
ITSN1-230ENST00000488166 LAMA2P24043 3122 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms