RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 OGDHLQ9ULD0 1010 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 ZNF236Q9UL36 1845 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 B4GALNT3Q6L9W6 998 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 C7orf61Q8IZ16 206 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 ANKLE1Q8NAG6 615 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 NAPBQ9H115 298 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 C11orf49Q9H6J7 331 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 PCDH10Q9P2E7 1040 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
NIPAL3-207ENST00000488155 COBLO75128 1261 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 FAM47AQ5JRC9 791 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 LHX8Q68G74 356 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 ZMYND8Q9ULU4 1186 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-207ENST00000488155 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 F5H6K3 240 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 NDUFB10O96000 172 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 CAPN2P17655 700 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 PDE1AP54750 535 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 CTDSPL2Q05D32 466 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 KLRC3Q07444 240 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 HDAC1Q13547 482 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 PRAMEF19Q5SWL8 479 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 LRRC47Q8N1G4 583 aaKnown RBP13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 SHCBP1Q8NEM2 672 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 MROH8Q9H579 483 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 NYAP2Q9P242 653 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
NIPAL3-207ENST00000488155 PFASO15067 1338 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 STRNO43815 780 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 PGK2P07205 417 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 HOXC6P09630 235 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 SYN1P17600 705 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 STAT3P40763 770 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 FXR1P51114 621 aaKnown RBP eCLIP13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 PPARAQ07869 468 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 VPS53Q5VIR6 699 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 MYH6P13533 1939 aa13.46□□□□□ -0.25
NIPAL3-207ENST00000488155 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 IGKV6D-41A0A0C4DH26 115 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 VWA5AO00534 786 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 FCER1AP12319 257 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 TFAP4Q01664 338 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 PDE4BQ07343 736 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 MMP19Q99542 508 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 ADAMTS5Q9UNA0 930 aa13.45□□□□□ -0.26
NIPAL3-207ENST00000488155 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 FOXP2O15409 715 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 SLC25A27O95847 323 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 IGHDP01880 384 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 SLFN13Q68D06 897 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 RIOX2Q8IUF8 465 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 RILPL2Q969X0 211 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 MTMR4Q9NYA4 1195 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-207ENST00000488155 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 A0A0D9SFI3 127 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 TTLL1O95922 423 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 CYBAP13498 195 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 KCTD2Q14681 263 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 OLFML2BQ68BL8 750 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 RIPK3Q9Y572 518 aa13.43□□□□□ -0.26
NIPAL3-207ENST00000488155 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms