RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 MRPS9P82933 396 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PICALMQ13492 652 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 CCDC89Q8N998 374 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PPP4R1Q8TF05 950 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 OSBPL3Q9H4L5 887 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 ARMT1Q9H993 441 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PLCH2O75038 1416 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 CRCPO75575 148 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PUM3Q15397 648 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 C11orf57Q6ZUT1 292 aaPredicted RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 U2AF1L4Q8WU68 220 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 RIC8AQ9NPQ8 531 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 DNM3Q9UQ16 869 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PZPP20742 1482 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 CTTNBP2Q8WZ74 1663 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 RNMTO43148 476 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 ZNF827Q17R98 1081 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 RETREG2Q8NC44 543 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PLBD2Q8NHP8 589 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 KLHL29Q96CT2 875 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 CHUKO15111 745 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 IL9RQ01113 521 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 LRRC8CQ8TDW0 803 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 VPS54Q9P1Q0 977 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 STAP2Q9UGK3 403 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 SCOCQ9UIL1 159 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 ZMYM6O95789 1325 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 SHANK2Q9UPX8 1470 aa9.09□□□□□ -0.95
MCF2L2-212ENST00000488149 DCUN1D2Q6PH85 259 aa9.09□□□□□ -0.96
MCF2L2-212ENST00000488149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PPFIA2O75334 1257 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 TRIM37O94972 964 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 BBOF1Q8ND07 529 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 KRT12Q99456 494 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 POLR3EQ9NVU0 708 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PPP1R1BQ9UD71 204 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PPP6R2O75170 966 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 TTC16Q8NEE8 873 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 A0A0D9SFI3 127 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SLC39A14Q15043 492 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SUCLG2Q96I99 432 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 LSG1Q9H089 658 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SUDS3Q9H7L9 328 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PASKQ96RG2 1323 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 EXOC3O60645 756 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 H2AFZP0C0S5 128 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 ADCY8P40145 1251 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 RASA3Q14644 834 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 H2AFVQ71UI9 128 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 MYOCDQ8IZQ8 938 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 TMEM87AQ8NBN3 555 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 CCHCR1Q8TD31 782 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 NIP7Q9Y221 180 aaKnown RBP eCLIP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 ENC1O14682 589 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 CTNND1O60716 968 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 STMN1P16949 149 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 ST5P78524 1137 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 LRRC23Q53EV4 343 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 PALM2Q8IXS6 379 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 DCAF5Q96JK2 942 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 EPB41L5Q9HCM4 733 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 CLIC4Q9Y696 253 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 HEXIM1O94992 359 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 GCNT3O95395 438 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SKIP12755 728 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 NNTQ13423 1086 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 NELFCDQ8IXH7 590 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 FBXO41Q8TF61 875 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
MCF2L2-212ENST00000488149 SYCP2Q9BX26 1530 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 ARHGEF35A5YM69 484 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 EIF3CLB5ME19 914 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 GIPC1O14908 333 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 SETDB2Q96T68 719 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 EIF3CQ99613 913 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 MRPL44Q9H9J2 332 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 RCOR1Q9UKL0 485 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 USTQ9Y2C2 406 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 MORC2Q9Y6X9 1032 aaPredicted RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 ADCY9O60503 1353 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 KDM5AP29375 1690 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 RPN1P04843 607 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 NR1D1P20393 614 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 EEF1GP26641 437 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 TAF11Q15544 211 aa9.07□□□□□ -0.96
MCF2L2-212ENST00000488149 VSTM4Q8IW00 320 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms