RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SNW1Q13573 536 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 TCEAL1Q15170 157 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 DDR2Q16832 855 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 MSMPQ1L6U9 139 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 NBPF9Q3BBW0 867 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 NOL9Q5SY16 702 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 C7orf61Q8IZ16 206 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 CELF2-AS1Q8N7Q2 184 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 MICAL1Q8TDZ2 1067 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 KLHL6Q8WZ60 621 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 HAUS7Q99871 368 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 PRDM14Q9GZV8 571 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 TRIT1Q9H3H1 467 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 SNX11Q9Y5W9 270 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 GJB6O95452 261 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 NMIQ13287 307 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 AOC3Q16853 763 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 TMC3Q7Z5M5 1100 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 ADAT2Q7Z6V5 191 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 UBE2FQ969M7 185 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 MISP3Q96FF7 219 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 GBP3Q9H0R5 595 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 PCMTD2Q9NV79 361 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 GFOD1Q9NXC2 390 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 ST14Q9Y5Y6 855 aa5.91□□□□□ -1.46
ECHDC1-217ENST00000488087 MEIS1O00470 390 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 MED26O95402 600 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 EPHX1P07099 455 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 NAT2P11245 290 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 ITGA4P13612 1032 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 CD247P20963 164 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 CD97P48960 835 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 PRKCQQ04759 706 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 STK11IPQ8N1F8 1099 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 ASB11Q8WXH4 323 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 PPP1R14AQ96A00 147 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 FGD4Q96M96 766 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 DSCC1Q9BVC3 393 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 GPR62Q9BZJ7 368 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 VAV3Q9UKW4 847 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 ANGEL1Q9UNK9 670 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 SUGT1Q9Y2Z0 365 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.46
ECHDC1-217ENST00000488087 SHISA3A0PJX4 238 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 ANKRD34BA5PLL1 514 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 SHOXO15266 292 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 CBFA2T2O43439 604 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 SIGLEC6O43699 453 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 PRAMEF1O95521 474 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 TPP2P29144 1249 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 ANKRD39Q53RE8 183 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 EEPD1Q7L9B9 569 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 THAP5Q7Z6K1 395 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 VSIG10LQ86VR7 867 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 ADCY4Q8NFM4 1077 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 BRF1Q92994 677 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 APBA2Q99767 749 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 DUSP15Q9H1R2 295 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 GP6Q9HCN6 339 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 ATP13A1Q9HD20 1204 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 CHST7Q9NS84 486 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 PITPNM2Q9BZ72 1349 aa5.89□□□□□ -1.47
ECHDC1-217ENST00000488087 PAX4O43316 350 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 HYAL3O43820 417 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 PPM1BO75688 479 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 SRFP11831 508 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 YBX3P16989 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 LTKP29376 864 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 CD96P40200 585 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 TXKP42681 527 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 BNIP3Q12983 259 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 IKZF1Q13422 519 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 SV2CQ496J9 727 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 MRM1Q6IN84 353 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 TSPYL5Q86VY4 417 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 DTX1Q86Y01 620 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 ENOX1Q8TC92 643 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 BCL7CQ8WUZ0 217 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 SRPK1Q96SB4 655 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 NOL6Q9H6R4 1146 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 WHRNQ9P202 907 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 CCDC39Q9UFE4 941 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 DUSP13Q9UII6 198 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 MINPP1Q9UNW1 487 aa5.88□□□□□ -1.47
ECHDC1-217ENST00000488087 SSU72P8A0A1W2PR75 194 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 KIAA1324LA8MWY0 1029 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 SUSD5O60279 629 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 SPINK2P20155 84 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 ZNF143P52747 638 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 ZNF445P59923 1031 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms