RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
EPHA1-205ENST00000488068 NT5DC1Q5TFE4 455 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 PODNQ7Z5L7 613 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 BLIDQ8IZY5 108 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
EPHA1-205ENST00000488068 GABPAQ06546 454 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 G3V3G9 751 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
EPHA1-205ENST00000488068 POSTNQ15063 836 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 SPECC1Q5M775 1068 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 MRIQ9BWK5 157 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
EPHA1-205ENST00000488068 MYO1BO43795 1136 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 PTGS1P23219 599 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 DOK7Q18PE1 504 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 CCDC186Q7Z3E2 898 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
EPHA1-205ENST00000488068 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 PCDHA5Q9Y5H7 936 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
EPHA1-205ENST00000488068 H0YIN7 160 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
EPHA1-205ENST00000488068 NCAPHQ15003 741 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 GREB1LQ9C091 1923 aaPredicted RBP16.91■□□□□ 0.3
EPHA1-205ENST00000488068 KLRF2D3W0D1 207 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 M0R2N6 131 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 CYTH3O43739 400 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
EPHA1-205ENST00000488068 SARSP49591 514 aaKnown RBP16.91■□□□□ 0.3
EPHA1-205ENST00000488068 ZNF174Q15697 407 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
EPHA1-205ENST00000488068 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
EPHA1-205ENST00000488068 ARL6IP4Q66PJ3 421 aaKnown RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 PYM1Q9BRP8 204 aaKnown RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 NEMFO60524 1076 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 PTGDRQ13258 359 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 WWC2Q6AWC2 1192 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 CCDC12Q8WUD4 166 aaPredicted RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 GPKOWQ92917 476 aaPredicted RBP eCLIP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 USP40Q9NVE5 1235 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
EPHA1-205ENST00000488068 STXBP3O00186 592 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 WNT7AO00755 349 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 DACH1Q9UI36 760 aa16.9■□□□□ 0.3
EPHA1-205ENST00000488068 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
EPHA1-205ENST00000488068 MYL5Q02045 173 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 PICALMQ13492 652 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 SPATA20Q8TB22 786 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 SMARCE1Q969G3 411 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 FEZ1Q99689 392 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
EPHA1-205ENST00000488068 SLFN14P0C7P3 912 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 SYMPKQ92797 1274 aaKnown RBP16.89■□□□□ 0.29
EPHA1-205ENST00000488068 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
EPHA1-205ENST00000488068 MTMR4Q9NYA4 1195 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 MAN1B1Q9UKM7 699 aa16.89■□□□□ 0.29
EPHA1-205ENST00000488068 hCG_1984214I3L0E3 225 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 APOBEC3HQ6NTF7 200 aaKnown RBP16.88■□□□□ 0.29
EPHA1-205ENST00000488068 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 USP49Q70CQ1 688 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 ZNF713Q8N859 430 aaPredicted RBP16.88■□□□□ 0.29
EPHA1-205ENST00000488068 MLKLQ8NB16 471 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 FOXN1O15353 648 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
EPHA1-205ENST00000488068 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
EPHA1-205ENST00000488068 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 EHD4Q9H223 541 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 PCDHA6Q9UN73 950 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 PCDHA8Q9Y5H6 950 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 SCN9AQ15858 1988 aa16.88■□□□□ 0.29
EPHA1-205ENST00000488068 CCDC194A0A1B0GVG4 234 aa16.87■□□□□ 0.29
EPHA1-205ENST00000488068 SMC2O95347 1197 aa16.87■□□□□ 0.29
EPHA1-205ENST00000488068 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
EPHA1-205ENST00000488068 MORC3Q14149 939 aa16.87■□□□□ 0.29
EPHA1-205ENST00000488068 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
EPHA1-205ENST00000488068 SLC15A2Q16348 729 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms