RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SCNN1AP37088 669 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
SEC22C-215ENST00000487701 SF3B3Q15393 1217 aaKnown RBP8.17□□□□□ -1.1
SEC22C-215ENST00000487701 ALDH1L2Q3SY69 923 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 PRRT3Q5FWE3 981 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 UBE3BQ7Z3V4 1068 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 PRDM6Q9NQX0 595 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 SMC4Q9NTJ3 1288 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 RNF181Q9P0P0 153 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
SEC22C-215ENST00000487701 ZNF646O15015 1829 aaPredicted RBP8.17□□□□□ -1.1
SEC22C-215ENST00000487701 PTPRCP08575 1304 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 GPLD1P80108 840 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 GRAPQ13588 217 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 CCDC93Q567U6 631 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 GRAPLQ8TC17 118 aaPredicted RBP8.16□□□□□ -1.1
SEC22C-215ENST00000487701 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 CELF1Q92879 486 aaKnown RBP8.16□□□□□ -1.1
SEC22C-215ENST00000487701 TAOK3Q9H2K8 898 aa8.16□□□□□ -1.1
SEC22C-215ENST00000487701 WDR90Q96KV7 1748 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 PDE8AO60658 829 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 RGS9O75916 674 aaPredicted RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 EGFRP00533 1210 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 PSAPP07602 524 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 SPATA31C1P0DKV0 1188 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 NID1P14543 1247 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 EIF2AK2P19525 551 aaKnown RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 LMNB1P20700 586 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 CTSWP56202 376 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 FKBP4Q02790 459 aaKnown RBP eCLIP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 SOGA3Q5TF21 947 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 HFE2Q6ZVN8 426 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 DDX46Q7L014 1031 aaKnown RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 ZNF277Q9NRM2 450 aaPredicted RBP8.15□□□□□ -1.1
SEC22C-215ENST00000487701 ATP6V0A2Q9Y487 856 aa8.15□□□□□ -1.1
SEC22C-215ENST00000487701 SCN4AP35499 1836 aa8.15□□□□□ -1.11
SEC22C-215ENST00000487701 RTL9Q8NET4 1388 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 GRM8O00222 908 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 ZBTB39O15060 712 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 MMP20O60882 483 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 BCAR3O75815 825 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 ELMSAN1Q6PJG2 1045 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 TTLL11Q8NHH1 800 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 ZNF526Q8TF50 670 aaPredicted RBP8.14□□□□□ -1.11
SEC22C-215ENST00000487701 PLA2G12BQ9BX93 195 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 SRCIN1Q9C0H9 1055 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 GREM2Q9H772 168 aa8.14□□□□□ -1.11
SEC22C-215ENST00000487701 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
SEC22C-215ENST00000487701 NOB1Q9ULX3 412 aaKnown RBP8.14□□□□□ -1.11
SEC22C-215ENST00000487701 UTYO14607 1347 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 BBOX1O75936 387 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 HSP90B1P14625 803 aaKnown RBP8.13□□□□□ -1.11
SEC22C-215ENST00000487701 CHRNA4P43681 627 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 FOXO4P98177 505 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 PLAURQ03405 335 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
SEC22C-215ENST00000487701 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 EPHA10Q5JZY3 1008 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 SP8Q8IXZ3 490 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
SEC22C-215ENST00000487701 KAZALD1Q96I82 304 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 PSMD1Q99460 953 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
SEC22C-215ENST00000487701 MYH13Q9UKX3 1938 aa8.13□□□□□ -1.11
SEC22C-215ENST00000487701 KIF16BQ96L93 1317 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 C1QTNF9BB2RNN3 333 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 K7ELQ4 463 aaPredicted RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 CSF1RP07333 972 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 NBPF7P0C2Y1 421 aaPredicted RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 AFF1P51825 1210 aaKnown RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 NRLP54845 237 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 TMC4Q7Z404 712 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 SUCLG2Q96I99 432 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
SEC22C-215ENST00000487701 RTFDC1Q9BY42 306 aaPredicted RBP8.12□□□□□ -1.11
SEC22C-215ENST00000487701 POLR2AP24928 1970 aaKnown RBP8.11□□□□□ -1.11
SEC22C-215ENST00000487701 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 TRIM27P14373 513 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 MPSTP25325 297 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 GPSM2P81274 684 aa8.11□□□□□ -1.11
SEC22C-215ENST00000487701 MTMR3Q13615 1198 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms