RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 CYP46A1Q9Y6A2 500 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 A0A0G2JMZ2 1700 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
PRDM2-208ENST00000487453 CEP350Q5VT06 3117 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 BMP3P12645 472 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 CRHR2Q13324 411 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 IGDCC4Q8TDY8 1250 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 DCAF4Q8WV16 495 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 GMCL1Q96IK5 515 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 TM6SF1Q9BZW5 370 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 ASCC2Q9H1I8 757 aaPredicted RBP14.94□□□□□ -0.02
PRDM2-208ENST00000487453 SENP2Q9HC62 589 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 ZSWIM6Q9HCJ5 1215 aa14.94□□□□□ -0.02
PRDM2-208ENST00000487453 FLOT1O75955 427 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 PDHBP11177 359 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
PRDM2-208ENST00000487453 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
PRDM2-208ENST00000487453 Q6ZUG5 572 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 KCTD1Q719H9 257 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 CATIPQ7Z7H3 387 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 ANKS1AQ92625 1134 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 ZFYVE28Q9HCC9 887 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 SAGE1Q9NXZ1 904 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 TSKSQ9UJT2 592 aa14.93□□□□□ -0.02
PRDM2-208ENST00000487453 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
PRDM2-208ENST00000487453 CA12O43570 354 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
PRDM2-208ENST00000487453 STAT2P52630 851 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 HERVK_113P62684 666 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 CATSPERGQ6ZRH7 1159 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 ZNF654Q8IZM8 581 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 NUP133Q8WUM0 1156 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 BRF1Q92994 677 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 MYL10Q9BUA6 226 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 FBXO28Q9NVF7 368 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
PRDM2-208ENST00000487453 KLF18A0A0U1RQI7 1052 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 TMEM232C9JQI7 657 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 HSPA1AP0DMV8 641 aaKnown RBP14.91□□□□□ -0.02
PRDM2-208ENST00000487453 HSPA1BP0DMV9 641 aaKnown RBP14.91□□□□□ -0.02
PRDM2-208ENST00000487453 LIFRP42702 1097 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 ZNF543Q08ER8 600 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 SYNE3Q6ZMZ3 975 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 MICU3Q86XE3 530 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 RAB11FIP4Q86YS3 637 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 TBC1D32Q96NH3 1257 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 PAGR1Q9BTK6 254 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 PDRG1Q9NUG6 133 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
PRDM2-208ENST00000487453 RLFQ13129 1914 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 COL11A1P12107 1806 aaPredicted RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 SPDYE16A6NNV3 312 aaPredicted RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 TLR2O60603 784 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 DDAH1O94760 285 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 SNHG28P0DPA3 235 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 RXRAP19793 462 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 APOBRQ0VD83 1088 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 COG2Q14746 738 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 ASPRV1Q53RT3 343 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 GPATCH4Q5T3I0 446 aaKnown RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 APOA5Q6Q788 366 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 CCDC144CPQ8IYA2 1237 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 CTCFLQ8NI51 663 aaPredicted RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 P2RX7Q99572 595 aaKnown RBP14.9□□□□□ -0.02
PRDM2-208ENST00000487453 SLF1Q9BQI6 1058 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 CPA4Q9UI42 421 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 FEM1BQ9UK73 627 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
PRDM2-208ENST00000487453 GOLGA8BA8MQT2 603 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 DHX16O60231 1041 aaKnown RBP14.89□□□□□ -0.03
PRDM2-208ENST00000487453 CALM1P0DP23 149 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 CALM2P0DP24 149 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 CALM3P0DP25 149 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 SLC16A2P36021 539 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 NEK4P51957 841 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 FAM160B2Q86V87 743 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 ANKRD13CQ8N6S4 541 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 ATG4CQ96DT6 458 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 IL17RAQ96F46 866 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
PRDM2-208ENST00000487453 ADGRA2Q96PE1 1338 aa14.89□□□□□ -0.03
PRDM2-208ENST00000487453 ZBTB43O43298 467 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 DSG3P32926 999 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 KIF5BP33176 963 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 GCLCP48506 637 aaPredicted RBP14.88□□□□□ -0.03
PRDM2-208ENST00000487453 TROAPQ12815 778 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 TOB2Q14106 344 aaPredicted RBP14.88□□□□□ -0.03
PRDM2-208ENST00000487453 GRM4Q14833 912 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
PRDM2-208ENST00000487453 PRPF38AQ8NAV1 312 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms