RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 KIF23Q02241 960 aaPredicted RBP9.27□□□□□ -0.93
ZNF541-204ENST00000487275 KLRC3Q07444 240 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 PRAMEF18Q5VWM3 479 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 SIAH1Q8IUQ4 282 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 GMCL1P1Q8NEA9 526 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
ZNF541-204ENST00000487275 UBA5Q9GZZ9 404 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 VPS54Q9P1Q0 977 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 CNPY2Q9Y2B0 182 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 FIBPO43427 364 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 CYTH3O43739 400 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 PRPF40AO75400 957 aaKnown RBP9.26□□□□□ -0.93
ZNF541-204ENST00000487275 KRT2P35908 639 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 ECE1P42892 770 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 NLRP5P59047 1200 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 EAPPQ56P03 285 aaPredicted RBP9.26□□□□□ -0.93
ZNF541-204ENST00000487275 ATL3Q6DD88 541 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 KRT26Q7Z3Y9 468 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 HOMER1Q86YM7 354 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 DIS3L2Q8IYB7 885 aaKnown RBP9.26□□□□□ -0.93
ZNF541-204ENST00000487275 ACER1Q8TDN7 264 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
ZNF541-204ENST00000487275 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 WRNIP1Q96S55 665 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 FEZ1Q99689 392 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 CPVLQ9H3G5 476 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 TAF1DQ9H5J8 278 aaPredicted RBP9.26□□□□□ -0.93
ZNF541-204ENST00000487275 RIOX1Q9H6W3 641 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 SH3GLB2Q9NR46 395 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 CFAP45Q9UL16 551 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
ZNF541-204ENST00000487275 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 ADM5C9JUS6 153 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 BMP3P12645 472 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 CALML3P27482 149 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 INPP5BP32019 993 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 SLC35G1Q2M3R5 365 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 SCYL3Q8IZE3 742 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 ADGRF4Q8IZF3 695 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 TMEM87AQ8NBN3 555 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 CCDC148Q8NFR7 591 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 CCDC12Q8WUD4 166 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 GPKOWQ92917 476 aaPredicted RBP eCLIP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 PIGSQ96S52 555 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 ANP32EQ9BTT0 268 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 PHF20Q9BVI0 1012 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 SCAND2PQ9GZW5 306 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 FOXP1Q9H334 677 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 VCPKMTQ9H867 229 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
ZNF541-204ENST00000487275 ZNF112Q9UJU3 913 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 MYH4Q9Y623 1939 aa9.25□□□□□ -0.93
ZNF541-204ENST00000487275 BTBD18B2RXH4 712 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 TRAK2O60296 914 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 U2AF2P26368 475 aaKnown RBP eCLIP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 NF2P35240 595 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 SLC16A2P36021 539 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 NAPAP54920 295 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 PRKG1Q13976 671 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 ZYXQ15942 572 aaKnown RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 MYSM1Q5VVJ2 828 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 CCDC84Q86UT8 332 aaPredicted RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 NOSTRINQ8IVI9 506 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 SPICE1Q8N0Z3 855 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 FAM177A1Q8N128 213 aaPredicted RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 NUP88Q99567 741 aaPredicted RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 AS3MTQ9HBK9 375 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 BARHL2Q9NY43 387 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
ZNF541-204ENST00000487275 DDX49Q9Y6V7 483 aaKnown RBP9.24□□□□□ -0.93
ZNF541-204ENST00000487275 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
ZNF541-204ENST00000487275 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
ZNF541-204ENST00000487275 TMEM232C9JQI7 657 aa9.23□□□□□ -0.93
ZNF541-204ENST00000487275 STXBP3O00186 592 aa9.23□□□□□ -0.93
ZNF541-204ENST00000487275 ZBTB5O15062 677 aa9.23□□□□□ -0.93
ZNF541-204ENST00000487275 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
ZNF541-204ENST00000487275 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
ZNF541-204ENST00000487275 CEBPZQ03701 1054 aaKnown RBP9.23□□□□□ -0.93
ZNF541-204ENST00000487275 NOL9Q5SY16 702 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms