RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 C16orf86Q6ZW13 317 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 FASTKD5Q7L8L6 764 aaKnown RBP8.58□□□□□ -1.04
UBE4B-209ENST00000487244 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
UBE4B-209ENST00000487244 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
UBE4B-209ENST00000487244 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 KIAA0100Q14667 2235 aaKnown RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 LAMA4Q16363 1823 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 A0A1W2PRG0 241 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 MPHOSPH10O00566 681 aaKnown RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 APPP05067 770 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 BCRP11274 1271 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 TDO2P48775 406 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 NMIQ13287 307 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 KIAA1755Q5JYT7 1200 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 ZNF589Q86UQ0 364 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 SKAP1Q86WV1 359 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 RILPL2Q969X0 211 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 FEZ1Q99689 392 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 ARPP21Q9UBL0 812 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 PLXNB2O15031 1838 aa8.57□□□□□ -1.04
UBE4B-209ENST00000487244 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-209ENST00000487244 BRCA2P51587 3418 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 PRDM1O75626 825 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 GNAT2P19087 354 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 RASA1P20936 1047 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 SBK1Q52WX2 424 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 GIMAP6Q6P9H5 292 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 SIAH1Q8IUQ4 282 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 IFNL3Q8IZI9 196 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 ANKRD13CQ8N6S4 541 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 SMCR8Q8TEV9 937 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 TRIM47Q96LD4 638 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBE4B-209ENST00000487244 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 SWAP70Q9UH65 585 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 TACC3Q9Y6A5 838 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 A0A0G2JMZ2 1700 aa8.56□□□□□ -1.04
UBE4B-209ENST00000487244 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-209ENST00000487244 C19orf81C9J6K1 198 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 VCAM1P19320 739 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 SDSP20132 328 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 PSMC4P43686 418 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 TTC22Q5TAA0 569 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 TMEM179Q6ZVK1 233 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 AMOTL1Q8IY63 956 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 KIAA1683Q9H0B3 1180 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 NAPBQ9H115 298 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 IL25Q9H293 177 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 TXNRD2Q9NNW7 524 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 INCENPQ9NQS7 918 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 TMOD4Q9NZQ9 345 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 ADGRG1Q9Y653 693 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 PTCH2Q9Y6C5 1203 aa8.55□□□□□ -1.04
UBE4B-209ENST00000487244 RBBP6Q7Z6E9 1792 aaKnown RBP8.54□□□□□ -1.04
UBE4B-209ENST00000487244 OATP04181 439 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 SLC4A3P48751 1232 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 SOX10P56693 466 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 IRX3P78415 501 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-209ENST00000487244 ICA1Q05084 483 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 CTDSPL2Q05D32 466 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 PPARAQ07869 468 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 PKN2Q16513 984 aaKnown RBP8.54□□□□□ -1.04
UBE4B-209ENST00000487244 MCMDC2Q4G0Z9 681 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBE4B-209ENST00000487244 SPICE1Q8N0Z3 855 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 C12orf42Q96LP6 360 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 P2RX7Q99572 595 aaKnown RBP8.54□□□□□ -1.04
UBE4B-209ENST00000487244 HELLSQ9NRZ9 838 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 CCDC171Q6TFL3 1326 aa8.54□□□□□ -1.04
UBE4B-209ENST00000487244 GPR37O15354 613 aa8.53□□□□□ -1.04
UBE4B-209ENST00000487244 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-209ENST00000487244 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
UBE4B-209ENST00000487244 EEF2P13639 858 aaKnown RBP8.53□□□□□ -1.04
UBE4B-209ENST00000487244 HOXA7P31268 230 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-209ENST00000487244 HERVK_113P62684 666 aa8.53□□□□□ -1.04
UBE4B-209ENST00000487244 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
UBE4B-209ENST00000487244 KIF22Q14807 665 aa8.53□□□□□ -1.04
UBE4B-209ENST00000487244 FAM110CQ1W6H9 321 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms