RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 GMLQ99445 158 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 PLVAPQ9BX97 442 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 AATKQ6ZMQ8 1374 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 MAP3K19Q56UN5 1328 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 LOC100289279A0A1B0GTE1 492 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 WIPF1O43516 503 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 ADAM11O75078 769 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CTSBP07858 339 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 ATP2B1P20020 1258 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CRKP46108 304 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 VPS72Q15906 364 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CC2D1BQ5T0F9 858 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 SCARA3Q6AZY7 606 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 FBXO11Q86XK2 927 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 FMR1NBQ8N0W7 255 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 GPBAR1Q8TDU6 330 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 IP6K1Q92551 441 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CCDC86Q9H6F5 360 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 GINM1Q9NU53 330 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 MKL2Q9ULH7 1088 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
RTFDC1-209ENST00000487211 RREB1Q92766 1687 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 FAM221AA4D161 298 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 GNB5O14775 395 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 BPNT1O95861 308 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 LIG1P18858 919 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 HOXC9P31274 260 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 NASPP49321 788 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 SEZ6Q53EL9 994 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.089e-7■□□□□ 10.7
RTFDC1-209ENST00000487211 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 POLKQ9UBT6 870 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 PCDHA4Q9UN74 947 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 RGPD1P0DJD0 1748 aa8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 MARF1Q9Y4F3 1742 aaKnown RBP8.31□□□□□ -1.08
RTFDC1-209ENST00000487211 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 NFAT5O94916 1531 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 PHRF1Q9P1Y6 1649 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 ABCA3Q99758 1704 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 PIK3R2O00459 728 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 ZNF862O60290 1169 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 CILPO75339 1184 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 AMPHP49418 695 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 TRIM28Q13263 835 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 MPP2Q14168 576 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 HP1BP3Q5SSJ5 553 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 JMYQ8N9B5 988 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 UBASH3BQ8TF42 649 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 SEC16BQ96JE7 1060 aa8.3□□□□□ -1.08
RTFDC1-209ENST00000487211 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 DISP2A7MBM2 1401 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 DLL1O00548 723 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 MCM4P33991 863 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 MCF2L2Q86YR7 1114 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 ZSCAN1Q8NBB4 408 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 UBXN4Q92575 508 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 WDR89Q96FK6 387 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 LTV1Q96GA3 475 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 LRRC3Q9BY71 257 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 CACNA2D2Q9NY47 1150 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 WDR90Q96KV7 1748 aa8.29□□□□□ -1.08
RTFDC1-209ENST00000487211 COL18A1P39060 1754 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 CASZ1Q86V15 1759 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 CUL9Q8IWT3 2517 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 DLGAP3O95886 979 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 SSBP05455 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 FGRP09769 529 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 GTF2F1P35269 517 aaKnown RBP eCLIP8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 RPL6Q02878 288 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 TOM1L2Q6ZVM7 507 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 PODNQ7Z5L7 613 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 SLITRK4Q8IW52 837 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 RAD18Q9NS91 495 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 WDR17Q8IZU2 1322 aa8.28□□□□□ -1.08
RTFDC1-209ENST00000487211 COL14A1Q05707 1796 aaKnown RBP8.27□□□□□ -1.08
RTFDC1-209ENST00000487211 COL5A2P05997 1499 aaPredicted RBP8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 NSD2O96028 1365 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 NPC1L1Q9UHC9 1359 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 KCNQ2O43526 872 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 SOX9P48436 509 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 CDK8P49336 464 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 COL9A2Q14055 689 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms