RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 RIOX1Q9H6W3 641 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 SH2D4AQ9H788 454 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 GJB4Q9NTQ9 266 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 GPRC5DQ9NZD1 345 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 VPS54Q9P1Q0 977 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 PGAP2Q9UHJ9 254 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 HACL1Q9UJ83 578 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 ISY1Q9ULR0 285 aaKnown RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 NOL7Q9UMY1 257 aaKnown RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 KCNJ14Q9UNX9 436 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 CEP131Q9UPN4 1083 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 MTMR7Q9Y216 660 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 PPP2R3BQ9Y5P8 575 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
VAMP3-203ENST00000487194 MYH15Q9Y2K3 1946 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 SHTN1A0MZ66 631 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 BTBD18B2RXH4 712 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 UBE2Q2LH0YL09 131 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GRIN3BO60391 1043 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 CAPN15O75808 1086 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 LETM1O95202 739 aaPredicted RBP7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GDF11O95390 407 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 BMP15O95972 392 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 ASNSP08243 561 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GOLGA8HP0CJ92 632 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 SLC1A4P43007 532 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 ANO1Q5XXA6 986 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 DCAF15Q66K64 600 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 SLFN13Q68D06 897 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 CAVIN1Q6NZI2 390 aaKnown RBP7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GMCL1Q96IK5 515 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
VAMP3-203ENST00000487194 DEFB129Q9H1M3 183 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 GOPCQ9HD26 462 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 BARHL2Q9NY43 387 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 RNF181Q9P0P0 153 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 ZBTB21Q9ULJ3 1066 aa7.08□□□□□ -1.28
VAMP3-203ENST00000487194 FRMPD2Q68DX3 1309 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PITPNM2Q9BZ72 1349 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 A0A1W2PQ27 194 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 A0A1W2PQ64 194 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 A0A1W2PQD8 194 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 hCG_1642624A0A1W2PR95 340 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 F5H6K3 240 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 STXBP3O00186 592 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 SPTLC2O15270 562 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 CYTH3O43739 400 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PPP6R2O75170 966 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 EGFRP00533 1210 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 BMP3P12645 472 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
VAMP3-203ENST00000487194 GNA11P29992 359 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 CAP2P40123 477 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 ME1P48163 572 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 TRAPPC10P48553 1259 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 CEBPZQ03701 1054 aaKnown RBP7.07□□□□□ -1.28
VAMP3-203ENST00000487194 KLRC3Q07444 240 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 TRAF1Q13077 416 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 SLC39A14Q15043 492 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 SUPT20HL1Q3ZLR7 823 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 CCDC183Q5T5S1 534 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 C9orf131Q5VYM1 1079 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 ADALQ6DHV7 355 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 DPY19L2Q6NUT2 758 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PPP1R18Q6NYC8 613 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 MIGA2Q7L4E1 593 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 HEATR3Q7Z4Q2 680 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 HOMER1Q86YM7 354 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 CLEC10AQ8IUN9 316 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 DAGLBQ8NCG7 672 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 LINC00301Q8NCQ3 95 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 BICD2Q8TD16 824 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 TEPSINQ96N21 525 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 ZNF341Q9BYN7 854 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 GLT8D2Q9H1C3 349 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 C6orf50Q9HD87 102 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 GPCPD1Q9NPB8 672 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 ADARB2Q9NS39 739 aaKnown RBP7.07□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHA4Q9UN74 947 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-203ENST00000487194 MYH4Q9Y623 1939 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 SBF1O95248 1867 aa7.07□□□□□ -1.28
VAMP3-203ENST00000487194 ESYT2A0FGR8 921 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 TRIM75PA6NK02 468 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 PHF20L1A8MW92 1017 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 ZBTB5O15062 677 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 RAD21O60216 631 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 CTNND1O60716 968 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 NDUFB10O96000 172 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 NAPAP54920 295 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 ZNF445P59923 1031 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 NR5A1Q13285 461 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 RRP1BQ14684 758 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 GPR162Q16538 588 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 SLC35G1Q2M3R5 365 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms