RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 HDAC6Q9UBN7 1215 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 USP31Q70CQ4 1352 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 A0A1B0GTH6 734 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PARP1P09874 1014 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PTGDRQ13258 359 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 RASGRP2Q7LDG7 609 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 VIPAS39Q9H9C1 493 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 TLDC2A0PJX2 215 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PDCLQ13371 301 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 NR1I3Q14994 352 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PPP2R5BQ15173 497 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 KLHL7Q8IXQ5 586 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 LRRC45Q96CN5 670 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 SELENOSQ9BQE4 189 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 PRDM1O75626 825 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 RPN1P04843 607 aaKnown RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 PDE6AP16499 860 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 ITGA6P23229 1130 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 LRRC31Q6UY01 552 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 ANKRD13CQ8N6S4 541 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 INCENPQ9NQS7 918 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 OVOS2A0A0J9YW53 1432 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 OVOS2Q6IE36 1432 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 KIF20BQ96Q89 1820 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 CYP27A1Q02318 531 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 NEDD9Q14511 834 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 TTLL7Q6ZT98 887 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 MSANTD4Q8NCY6 345 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 VEZTQ9HBM0 779 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 CDC27P30260 824 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 CDC25AP30304 524 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 PPP1R2P41236 205 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 SLC7A5Q01650 507 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 APBA1Q02410 837 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 NNTQ13423 1086 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 CAVIN4Q5BKX8 364 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 PNMA8AQ86V59 439 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 NSRP1Q9H0G5 558 aaKnown RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 BAIAP2L1Q9UHR4 511 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 CXCR5P32302 372 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 FXR1P51114 621 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 TCERG1LQ5VWI1 586 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 RRAGAQ7L523 313 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 SAMD15Q9P1V8 674 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 RWDD2AQ9UIY3 292 aa8.53□□□□□ -1.04
COL6A4P1-202ENST00000487147 NPHP4O75161 1426 aaPredicted RBP8.52□□□□□ -1.04
COL6A4P1-202ENST00000487147 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 B4DLN1 442 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ERCC3P19447 782 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 USP5P45974 858 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 TCP11X2Q5H9J9 407 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 FBXW10Q5XX13 1052 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ALS2CLQ60I27 953 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 PAIP2Q9BPZ3 127 aaKnown RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 TUBGCP2Q9BSJ2 902 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANKZF1Q9H8Y5 726 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ODF2LQ9ULJ1 636 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 SMIM23A6NLE4 172 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 NEBLO76041 1014 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 CIAO1O76071 339 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 EEF1GP26641 437 aaKnown RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 LIFRP42702 1097 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIAA0753Q2KHM9 967 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 EMBQ6PCB8 327 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 KAZALD1Q96I82 304 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 AATFQ9NY61 560 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 MROH1Q8NDA8 1641 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 IRS4O14654 1257 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 BUB1O43683 1085 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 BUB1BO60566 1050 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZPR1O75312 459 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ATP1A1P05023 1023 aaKnown RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 RAPGEF1Q13905 1077 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 RPAINQ86UA6 219 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 MMS19Q96T76 1030 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms