RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 RASIP1Q5U651 963 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 TMED8Q6PL24 325 aaPredicted RBP18.13■□□□□ 0.49
PFDN4-204ENST00000487129 C16orf59Q7L2K0 433 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 TOX2Q96NM4 488 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.13■□□□□ 0.495e-9■■■□□ 16.2
PFDN4-204ENST00000487129 TBX21Q9UL17 535 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 FLOT1O75955 427 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 CYP2D6P10635 497 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 OS9Q13438 667 aaPredicted RBP18.12■□□□□ 0.49
PFDN4-204ENST00000487129 CCSAPQ6IQ19 270 aaPredicted RBP18.12■□□□□ 0.49
PFDN4-204ENST00000487129 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 TMEM179Q6ZVK1 233 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 RNF180Q86T96 592 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 SPICE1Q8N0Z3 855 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 TIFAQ96CG3 184 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 TINF2Q9BSI4 451 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 TMEM39AQ9NV64 488 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 TMX2Q9Y320 296 aa18.12■□□□□ 0.49
PFDN4-204ENST00000487129 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
PFDN4-204ENST00000487129 CHD7Q9P2D1 2997 aa18.11■□□□□ 0.49
PFDN4-204ENST00000487129 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
PFDN4-204ENST00000487129 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
PFDN4-204ENST00000487129 PBX2P40425 430 aa18.11■□□□□ 0.49
PFDN4-204ENST00000487129 MAP3K12Q12852 859 aa18.11■□□□□ 0.49
PFDN4-204ENST00000487129 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
PFDN4-204ENST00000487129 VCPKMTQ9H867 229 aa18.11■□□□□ 0.49
PFDN4-204ENST00000487129 DIS3Q9Y2L1 958 aaKnown RBP18.11■□□□□ 0.49
PFDN4-204ENST00000487129 COL11A1P12107 1806 aaPredicted RBP18.11■□□□□ 0.49
PFDN4-204ENST00000487129 SYNRGQ9UMZ2 1314 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 MAGEB6P1A0A0J9YX57 407 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 SMIM22K7EJ46 135 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
PFDN4-204ENST00000487129 SLC25A27O95847 323 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 TIMP1P01033 207 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 AKR1B1P15121 316 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 ACLYP53396 1101 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
PFDN4-204ENST00000487129 KLHDC9Q8NEP7 349 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 REPS2Q8NFH8 660 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 TSEN34Q9BSV6 310 aaKnown RBP18.1■□□□□ 0.49
PFDN4-204ENST00000487129 PBX4Q9BYU1 374 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 DCP1AQ9NPI6 582 aaPredicted RBP18.1■□□□□ 0.49
PFDN4-204ENST00000487129 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 MCM9Q9NXL9 1143 aa18.1■□□□□ 0.49
PFDN4-204ENST00000487129 ZNF214Q9UL59 606 aaPredicted RBP18.1■□□□□ 0.49
PFDN4-204ENST00000487129 NCOR1O75376 2440 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 MYADML2A6NDP7 307 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 GRXCR1A8MXD5 290 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 AKR1A1P14550 325 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 PDE6AP16499 860 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 IRX5P78411 483 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-204ENST00000487129 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 TMEM240Q5SV17 173 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 AKNAD1Q5T1N1 836 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 RIOX2Q8IUF8 465 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 SDR42E1Q8WUS8 393 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 ATXN2LQ8WWM7 1075 aaKnown RBP18.09■□□□□ 0.49
PFDN4-204ENST00000487129 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-204ENST00000487129 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 MMP19Q99542 508 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 BDP1A6H8Y1 2624 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 PLXNA1Q9UIW2 1896 aa18.09■□□□□ 0.49
PFDN4-204ENST00000487129 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 WDR46O15213 610 aaKnown RBP18.08■□□□□ 0.48
PFDN4-204ENST00000487129 ICA1Q05084 483 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 ASB2Q96Q27 587 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 PRDM12Q9H4Q4 367 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.48
PFDN4-204ENST00000487129 ADCY6O43306 1168 aa18.07■□□□□ 0.48
PFDN4-204ENST00000487129 SNAI1O95863 264 aaPredicted RBP18.07■□□□□ 0.48
PFDN4-204ENST00000487129 CDK7P50613 346 aa18.07■□□□□ 0.48
PFDN4-204ENST00000487129 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
PFDN4-204ENST00000487129 THEGQ9P2T0 379 aa18.07■□□□□ 0.48
PFDN4-204ENST00000487129 REV3LO60673 3130 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 DCDC2CA8MYV0 355 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 VWA5AO00534 786 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 KCNA10Q16322 511 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 SLC9C2Q5TAH2 1124 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
PFDN4-204ENST00000487129 ADAMTS19Q8TE59 1207 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
PFDN4-204ENST00000487129 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 CSF2RAP15509 400 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 CST5P28325 142 aaPredicted RBP18.05■□□□□ 0.48
PFDN4-204ENST00000487129 STAT3P40763 770 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 KCTD2Q14681 263 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 NUP133Q8WUM0 1156 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
PFDN4-204ENST00000487129 ELP1O95163 1332 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 SYNGAP1Q96PV0 1343 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 DNAJC25-GNG10A0A024R161 153 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 PRKAB2O43741 272 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 PLA2G5P39877 138 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms