RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PICALMQ13492 652 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 ALG1LQ6GMV1 187 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 RGMBQ6NW40 437 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
SF1-217ENST00000486960 C2CD5Q86YS7 1000 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 ANKRD24Q8TF21 1146 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 SLC4A9Q96Q91 983 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 SERINC2Q96SA4 455 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 IWS1Q96ST2 819 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 TSPY26PQ9H489 355 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 CD248Q9HCU0 757 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 RAI14Q9P0K7 980 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 ZNF292O60281 2723 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 WDR87Q6ZQQ6 2873 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 KDRP35968 1356 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 KLF4O43474 513 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 PTCD1O75127 700 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 F2P00734 622 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 SLC10A3P09131 477 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 EPB42P16452 691 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 TM4SF1P30408 202 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 TSPAN7P41732 249 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 HALP42357 657 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 HTR3AP46098 478 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 BCAMP50895 628 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 ATP1A2P50993 1020 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 PURAQ00577 322 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 DDX10Q13206 875 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 GFOD2Q3B7J2 385 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 RGL3Q3MIN7 710 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 CT47A1Q5JQC4 288 aaPredicted RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 OTOP1Q7RTM1 612 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 RASSF3Q86WH2 238 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 DGKHQ86XP1 1220 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 TRIM50Q86XT4 487 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 CLASRPQ8N2M8 674 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 ARL6IP6Q8N6S5 226 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 FAM174AQ8TBP5 190 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 DPF3Q92784 378 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 SYMPKQ92797 1274 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 SHISA4Q96DD7 197 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 FAM163AQ96GL9 167 aaPredicted RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 ZNF496Q96IT1 587 aaPredicted RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 LRFN3Q9BTN0 628 aa6.48□□□□□ -1.37
SF1-217ENST00000486960 DNAAF2Q9NVR5 837 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 RBM19Q9Y4C8 960 aaKnown RBP6.48□□□□□ -1.37
SF1-217ENST00000486960 TPRP12270 2363 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 DNAH12Q6ZR08 3092 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 GTPBP10A4D1E9 387 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 PSMA3P25788 255 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 OAS2P29728 719 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 HMGN5P82970 282 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 ZBED6P86452 979 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 BIRC3Q13489 604 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 KIF22Q14807 665 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 MLC1Q15049 377 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 TCEA2Q15560 299 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 ZC3H12AQ5D1E8 599 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 CCDC158Q5M9N0 1113 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 KLHL10Q6JEL2 608 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 RASGRP4Q8TDF6 673 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 PIGBQ92521 554 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 TRMT2BQ96GJ1 504 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 PAIP2Q9BPZ3 127 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 CDK19Q9BWU1 502 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 IP6K2Q9UHH9 426 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 DACH1Q9UI36 760 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 MAFFQ9ULX9 164 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 SMC3Q9UQE7 1217 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 PLAAQ9Y263 795 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 RTCBQ9Y3I0 505 aaKnown RBP6.47□□□□□ -1.37
SF1-217ENST00000486960 ADGRG1Q9Y653 693 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 GPR179Q6PRD1 2367 aa6.47□□□□□ -1.37
SF1-217ENST00000486960 ZNF646O15015 1829 aaPredicted RBP6.46□□□□□ -1.37
SF1-217ENST00000486960 FZD9O00144 591 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 PES1O00541 588 aaKnown RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 RIMBP2O15034 1052 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 AKAP10O43572 662 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 SLC5A1P13866 664 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MZF1P28698 734 aaPredicted RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 ETFBP38117 255 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 EIF5P55010 431 aaKnown RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 NFKB2Q00653 900 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 TJP1Q07157 1748 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 HSP90B2PQ58FF3 399 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 JAKMIP3Q5VZ66 844 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 IL31Q6EBC2 164 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 PDXDC2PQ6P474 469 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MAATS1Q7Z4T9 603 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms