RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FGRP09769 529 aa7.33□□□□□ -1.24
COPS3-209ENST00000486810 PMS1P54277 932 aaKnown RBP7.33□□□□□ -1.24
COPS3-209ENST00000486810 TMPRSS7Q7RTY8 843 aa7.33□□□□□ -1.24
COPS3-209ENST00000486810 TEX2Q8IWB9 1127 aa7.33□□□□□ -1.24
COPS3-209ENST00000486810 IPO4Q8TEX9 1081 aaKnown RBP7.33□□□□□ -1.24
COPS3-209ENST00000486810 PUS7Q96PZ0 661 aaKnown RBP7.33□□□□□ -1.24
COPS3-209ENST00000486810 CRBNQ96SW2 442 aa7.33□□□□□ -1.24
COPS3-209ENST00000486810 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
COPS3-209ENST00000486810 GPATCH2Q9NW75 528 aa7.33□□□□□ -1.24
COPS3-209ENST00000486810 NAP1L2Q9ULW6 460 aaPredicted RBP7.33□□□□□ -1.24
COPS3-209ENST00000486810 CCDC180Q9P1Z9 1646 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 IRAK1P51617 712 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
COPS3-209ENST00000486810 AXDND1Q5T1B0 1012 aaPredicted RBP7.32□□□□□ -1.24
COPS3-209ENST00000486810 MCF2L2Q86YR7 1114 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 CREG2Q8IUH2 290 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 C19orf47Q8N9M1 422 aaKnown RBP7.32□□□□□ -1.24
COPS3-209ENST00000486810 OR6P1Q8NGX9 317 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 MKRN2Q9H000 416 aaKnown RBP7.32□□□□□ -1.24
COPS3-209ENST00000486810 ZNF214Q9UL59 606 aaPredicted RBP7.32□□□□□ -1.24
COPS3-209ENST00000486810 MRVI1Q9Y6F6 885 aa7.32□□□□□ -1.24
COPS3-209ENST00000486810 PRAMEF1O95521 474 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 TAL1P17542 331 aaPredicted RBP7.31□□□□□ -1.24
COPS3-209ENST00000486810 CASP7P55210 303 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 CHMP4BP1P59074 171 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 AUHQ13825 339 aaKnown RBP7.31□□□□□ -1.24
COPS3-209ENST00000486810 RALGPS1Q5JS13 557 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 DCAF15Q66K64 600 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 TICAM2Q86XR7 235 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 USHBP1Q8N6Y0 703 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 SLC43A3Q8NBI5 491 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 SYTL5Q8TDW5 730 aaPredicted RBP7.31□□□□□ -1.24
COPS3-209ENST00000486810 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 KLHL6Q8WZ60 621 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 ANAPC16Q96DE5 110 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 DHRS1Q96LJ7 313 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 GMLQ99445 158 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 RC3H2Q9HBD1 1191 aaKnown RBP7.31□□□□□ -1.24
COPS3-209ENST00000486810 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 STRIP2Q9ULQ0 834 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 PCDHB10Q9UN67 800 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 PCDHA11Q9Y5I1 949 aa7.31□□□□□ -1.24
COPS3-209ENST00000486810 DNAJC25-GNG10A0A024R161 153 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 SIGLEC6O43699 453 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 PAPLNO95428 1278 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 TP53P04637 393 aaPredicted RBP7.3□□□□□ -1.24
COPS3-209ENST00000486810 ITGB5P18084 799 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 ETFBP38117 255 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 MCTP1Q6DN14 999 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 C7orf61Q8IZ16 206 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 ENOX1Q8TC92 643 aaKnown RBP7.3□□□□□ -1.24
COPS3-209ENST00000486810 GFOD1Q9NXC2 390 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 ZNF281Q9Y2X9 895 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
COPS3-209ENST00000486810 CTSKP43235 329 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 TEKQ02763 1124 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 EGR3Q06889 387 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 CCDC144CPQ8IYA2 1237 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 DAGLBQ8NCG7 672 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 EBF1Q9UH73 591 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 CTNND2Q9UQB3 1225 aa7.29□□□□□ -1.24
COPS3-209ENST00000486810 FANCIQ9NVI1 1328 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
COPS3-209ENST00000486810 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 DNAJA1P31689 397 aaKnown RBP7.28□□□□□ -1.24
COPS3-209ENST00000486810 ARID5AQ03989 594 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 CLEC16AQ2KHT3 1053 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 ANKRD39Q53RE8 183 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 YTHDC1Q96MU7 727 aaKnown RBP7.28□□□□□ -1.24
COPS3-209ENST00000486810 ALPK1Q96QP1 1244 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.244e-6■□□□□ 10.2
COPS3-209ENST00000486810 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 SLAMF8Q9P0V8 285 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 FBXL21Q9UKT6 434 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 ZNF451Q9Y4E5 1061 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
COPS3-209ENST00000486810 LTKP29376 864 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 GNL2Q13823 731 aaKnown RBP7.27□□□□□ -1.25
COPS3-209ENST00000486810 PPP2R5EQ16537 467 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 NAALADL2Q58DX5 795 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 FLAD1Q8NFF5 587 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 SMARCC1Q92922 1105 aaPredicted RBP7.27□□□□□ -1.25
COPS3-209ENST00000486810 ZNF408Q9H9D4 720 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 SP110Q9HB58 689 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 CHST7Q9NS84 486 aa7.27□□□□□ -1.25
COPS3-209ENST00000486810 MEIS1O00470 390 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 IGSF3O75054 1194 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
COPS3-209ENST00000486810 NCLP19338 710 aaKnown RBP7.26□□□□□ -1.25
COPS3-209ENST00000486810 CD247P20963 164 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 ZNF445P59923 1031 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 ERVFC1P60507 584 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 ZC3H6P61129 1189 aaKnown RBP7.26□□□□□ -1.25
COPS3-209ENST00000486810 BBS9Q3SYG4 887 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
COPS3-209ENST00000486810 ATG4DQ86TL0 474 aaPredicted RBP7.26□□□□□ -1.25
COPS3-209ENST00000486810 ZNF655Q8N720 491 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms