RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 RAD50Q92878 1312 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 FRMPD3Q5JV73 1810 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 PLXNA1Q9UIW2 1896 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 TSPY2A6NKD2 308 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 HMGCRP04035 888 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 CCL5P13501 91 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 FAM83BQ5T0W9 1011 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 DSCC1Q9BVC3 393 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 SPATC1LQ9H0A9 340 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 BIN2Q9UBW5 565 aaPredicted RBP18.91■□□□□ 0.62
HDAC8-218ENST00000486704 PPP1R9AQ9ULJ8 1098 aa18.91■□□□□ 0.62
HDAC8-218ENST00000486704 SLC15A5A6NIM6 579 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 NOVP48745 357 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 TRMT44Q8IYL2 757 aaKnown RBP18.9■□□□□ 0.62
HDAC8-218ENST00000486704 STAG1Q8WVM7 1258 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 APBA2Q99767 749 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 MOV10L1Q9BXT6 1211 aaKnown RBP18.9■□□□□ 0.62
HDAC8-218ENST00000486704 NBPF3Q9H094 633 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 FBXO28Q9NVF7 368 aa18.9■□□□□ 0.62
HDAC8-218ENST00000486704 RAD21O60216 631 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 MYCP01106 439 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 GJB1P08034 283 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 EN2P19622 333 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 PTPREP23469 700 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 RGS2P41220 211 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 NT5C2P49902 561 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 GRB14Q14449 540 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 CENPQQ7L2Z9 268 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 LRRC47Q8N1G4 583 aaKnown RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 NKX2-3Q8TAU0 364 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 TRIB2Q92519 343 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 CWC22Q9HCG8 908 aaKnown RBP18.89■□□□□ 0.61
HDAC8-218ENST00000486704 INCENPQ9NQS7 918 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 IL17RBQ9NRM6 502 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 IVNS1ABPQ9Y6Y0 642 aa18.89■□□□□ 0.61
HDAC8-218ENST00000486704 VWA5AO00534 786 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 CYP2B6P20813 491 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 HAND2P61296 217 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 AKNAD1Q5T1N1 836 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 TBC1D10CQ8IV04 446 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 NUP88Q99567 741 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-218ENST00000486704 SLF1Q9BQI6 1058 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 RNF208Q9H0X6 261 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 UNC93B1Q9H1C4 597 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-218ENST00000486704 MROH8Q9H579 483 aa18.88■□□□□ 0.61
HDAC8-218ENST00000486704 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-218ENST00000486704 MKI67P46013 3256 aaKnown RBP18.88■□□□□ 0.61
HDAC8-218ENST00000486704 STRNO43815 780 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 HOXC6P09630 235 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 CAPN2P17655 700 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 GJA8P48165 433 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 TMEM132BQ14DG7 1078 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 WDR78Q5VTH9 848 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 REPS2Q8NFH8 660 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 SHISA4Q96DD7 197 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 GMCL1Q96IK5 515 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 IL25Q9H293 177 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 TCP11L1Q9NUJ3 509 aa18.87■□□□□ 0.61
HDAC8-218ENST00000486704 ZNF214Q9UL59 606 aaPredicted RBP18.87■□□□□ 0.61
HDAC8-218ENST00000486704 ZNF213O14771 459 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 NMT2O60551 498 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 SLC25A27O95847 323 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
HDAC8-218ENST00000486704 ERCC3P19447 782 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 CHMLP26374 656 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 COPB2P35606 906 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 MAP3K21Q5TCX8 1036 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 SLFN13Q68D06 897 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 MFSD6Q6ZSS7 791 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 ABRAQ8N0Z2 381 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 PRPF38AQ8NAV1 312 aaKnown RBP18.86■□□□□ 0.61
HDAC8-218ENST00000486704 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 CTNNA3Q9UI47 895 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 FEM1BQ9UK73 627 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 STX8Q9UNK0 236 aa18.86■□□□□ 0.61
HDAC8-218ENST00000486704 NEDD4P46934 1319 aa18.85■□□□□ 0.61
HDAC8-218ENST00000486704 ATP2A1O14983 1001 aa18.85■□□□□ 0.61
HDAC8-218ENST00000486704 PLS1Q14651 629 aa18.85■□□□□ 0.61
HDAC8-218ENST00000486704 RRP12Q5JTH9 1297 aaKnown RBP18.85■□□□□ 0.61
HDAC8-218ENST00000486704 RIOX2Q8IUF8 465 aa18.85■□□□□ 0.61
HDAC8-218ENST00000486704 RPTORQ8N122 1335 aa18.84■□□□□ 0.61
HDAC8-218ENST00000486704 BMP3P12645 472 aa18.84■□□□□ 0.61
HDAC8-218ENST00000486704 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
HDAC8-218ENST00000486704 SAMD1Q6SPF0 538 aaPredicted RBP18.84■□□□□ 0.61
HDAC8-218ENST00000486704 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
HDAC8-218ENST00000486704 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDAC8-218ENST00000486704 PLA2G6O60733 806 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 SGPL1O95470 568 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 FDX1P10109 184 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 PRKAR2AP13861 404 aaKnown RBP18.83■□□□□ 0.6
HDAC8-218ENST00000486704 ADORA2AP29274 412 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 STAT3P40763 770 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 STAT2P52630 851 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 TRIM32Q13049 653 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 CCL14Q16627 93 aa18.83■□□□□ 0.6
HDAC8-218ENST00000486704 FAM160B2Q86V87 743 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms