RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TCP11L1Q9NUJ3 509 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 GABRQQ9UN88 632 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 U3KPZ7 1027 aaPredicted RBP21.49■■□□□ 1.03
COL1A1-207ENST00000486572 FLT3LGP49771 235 aa21.48■■□□□ 1.03
COL1A1-207ENST00000486572 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
COL1A1-207ENST00000486572 ESYT1Q9BSJ8 1104 aa21.48■■□□□ 1.03
COL1A1-207ENST00000486572 PORCNQ9H237 461 aa21.48■■□□□ 1.03
COL1A1-207ENST00000486572 FBXO28Q9NVF7 368 aa21.48■■□□□ 1.03
COL1A1-207ENST00000486572 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 KIAA1211Q6ZU35 1233 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 NBPF11Q86T75 865 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 SLF1Q9BQI6 1058 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 CNNM2Q9H8M5 875 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 PPP1R9AQ9ULJ8 1098 aa21.47■■□□□ 1.03
COL1A1-207ENST00000486572 KDM4AO75164 1064 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 CDC45O75419 566 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 IRF5Q13568 498 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 CASC1Q6TDU7 716 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 NKX2-3Q8TAU0 364 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 GMCL1Q96IK5 515 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 KRT23Q9C075 422 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 CWC22Q9HCG8 908 aaKnown RBP21.46■■□□□ 1.03
COL1A1-207ENST00000486572 ADAMTS5Q9UNA0 930 aa21.46■■□□□ 1.03
COL1A1-207ENST00000486572 B4E1Z4 1266 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 CYP21A2P08686 494 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 TOP1P11387 765 aaKnown RBP21.45■■□□□ 1.02
COL1A1-207ENST00000486572 BMP3P12645 472 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 GRK4P32298 578 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 SLAIN1Q8ND83 568 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 SH3TC2Q8TF17 1288 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 SOCS4Q8WXH5 440 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 ZNF333Q96JL9 665 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 SPATC1LQ9H0A9 340 aa21.45■■□□□ 1.02
COL1A1-207ENST00000486572 VWA5AO00534 786 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 SLC1A4P43007 532 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 PLEKHH3Q7Z736 793 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 IQCA1Q86XH1 822 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 PRPF38AQ8NAV1 312 aaKnown RBP21.44■■□□□ 1.02
COL1A1-207ENST00000486572 TTC14Q96N46 770 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 TMEM47Q9BQJ4 181 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 MOV10L1Q9BXT6 1211 aaKnown RBP21.44■■□□□ 1.02
COL1A1-207ENST00000486572 LSG1Q9H089 658 aaKnown RBP21.44■■□□□ 1.02
COL1A1-207ENST00000486572 FEM1BQ9UK73 627 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
COL1A1-207ENST00000486572 ISY1Q9ULR0 285 aaKnown RBP21.44■■□□□ 1.02
COL1A1-207ENST00000486572 RBM8AQ9Y5S9 174 aaKnown RBP21.44■■□□□ 1.02
COL1A1-207ENST00000486572 ADCY3O60266 1144 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 MCCP23508 829 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 PLS1Q14651 629 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 CCDC178Q5BJE1 867 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 WDR78Q5VTH9 848 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 RCSD1Q6JBY9 416 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 SHCBP1Q8NEM2 672 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 PXYLP1Q8TE99 480 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 NUDT12Q9BQG2 462 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 ZKSCAN3Q9BRR0 538 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
COL1A1-207ENST00000486572 COL11A1P12107 1806 aaPredicted RBP21.42■■□□□ 1.02
COL1A1-207ENST00000486572 SOX10P56693 466 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 TRDNQ13061 729 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 TMEM132BQ14DG7 1078 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 DGKHQ86XP1 1220 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 DOCK3Q8IZD9 2030 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 ZSWIM5Q9P217 1185 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 IVNS1ABPQ9Y6Y0 642 aa21.42■■□□□ 1.02
COL1A1-207ENST00000486572 TMEM232C9JQI7 657 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 ELNP15502 786 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 STAT2P52630 851 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 MORN1Q5T089 497 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 RASGRP2Q7LDG7 609 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 REPS2Q8NFH8 660 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 DCAF4Q8WV16 495 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 KIFC2Q96AC6 838 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 CHMP4CQ96CF2 233 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 ZSCAN10Q96SZ4 725 aaPredicted RBP21.41■■□□□ 1.02
COL1A1-207ENST00000486572 ZNF214Q9UL59 606 aaPredicted RBP21.41■■□□□ 1.02
COL1A1-207ENST00000486572 MTMR7Q9Y216 660 aa21.41■■□□□ 1.02
COL1A1-207ENST00000486572 TNKSO95271 1327 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 ERCC3P19447 782 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
COL1A1-207ENST00000486572 CCDC96Q2M329 555 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 FAM160B2Q86V87 743 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 CHURC1Q8WUH1 139 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 UBAC1Q9BSL1 405 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 MROH8Q9H579 483 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 BIN2Q9UBW5 565 aaPredicted RBP21.4■■□□□ 1.02
COL1A1-207ENST00000486572 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
COL1A1-207ENST00000486572 ZNF236Q9UL36 1845 aa21.39■■□□□ 1.02
COL1A1-207ENST00000486572 SLC15A5A6NIM6 579 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 E7EWF7 191 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 ZBED4O75132 1171 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 SLC25A27O95847 323 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 PTPREP23469 700 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 RGS2P41220 211 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 RALYLQ86SE5 291 aaKnown RBP21.39■■□□□ 1.01
COL1A1-207ENST00000486572 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms