RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.72
COL12A1-208ENST00000486533 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.72
COL12A1-208ENST00000486533 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 MYH1P12882 1939 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 MYPNQ86TC9 1320 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 GOLGA6L6A8MZA4 724 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 BCRP11274 1271 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 CASTP20810 708 aaKnown RBP10.52□□□□□ -0.73
COL12A1-208ENST00000486533 AK2P54819 239 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 HMGCS2P54868 508 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 PRMT2P55345 433 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 TTF1Q15361 905 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-208ENST00000486533 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 NOL8Q76FK4 1167 aaKnown RBP10.52□□□□□ -0.73
COL12A1-208ENST00000486533 RAET1EQ8TD07 263 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 UBE2Q2Q8WVN8 375 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 AS3MTQ9HBK9 375 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 SRRDQ9UH36 339 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 SLC45A1Q9Y2W3 748 aa10.52□□□□□ -0.73
COL12A1-208ENST00000486533 MGAMO43451 1857 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 GOLIM4O00461 696 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 GDF11O95390 407 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 ASNSP08243 561 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 OSBPP22059 807 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 FCGRTP55899 365 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 KRT85P78386 507 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 CWC27Q6UX04 472 aaKnown RBP10.51□□□□□ -0.73
COL12A1-208ENST00000486533 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-208ENST00000486533 PROCA1Q8NCQ7 364 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-208ENST00000486533 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 KIF3AQ9Y496 699 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 LOC285556D6RIA3 1793 aa10.51□□□□□ -0.73
COL12A1-208ENST00000486533 PPP1R37O75864 691 aa10.5□□□□□ -0.73
COL12A1-208ENST00000486533 EN2P19622 333 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-208ENST00000486533 MTMR2Q13614 643 aa10.5□□□□□ -0.73
COL12A1-208ENST00000486533 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-208ENST00000486533 TMED8Q6PL24 325 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-208ENST00000486533 RUFY3Q7L099 469 aa10.5□□□□□ -0.73
COL12A1-208ENST00000486533 ANKRD13CQ8N6S4 541 aa10.5□□□□□ -0.73
COL12A1-208ENST00000486533 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-208ENST00000486533 JAKMIP1Q96N16 626 aaKnown RBP10.5□□□□□ -0.73
COL12A1-208ENST00000486533 ELP1O95163 1332 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 MAGEB6P1A0A0J9YX57 407 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 TNPO2O14787 897 aaKnown RBP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 PDE6AP16499 860 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 SYT1P21579 422 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 GRK4P32298 578 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 PRKCZQ05513 592 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 BLOC1S2Q6QNY1 142 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 TMOD4Q9NZQ9 345 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-208ENST00000486533 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 ZBTB21Q9ULJ3 1066 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 NAV1Q8NEY1 1877 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 ZNF532Q9HCE3 1301 aa10.49□□□□□ -0.73
COL12A1-208ENST00000486533 DYNC1I1O14576 645 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 CAVIN2O95810 425 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 BACE1P56817 501 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 JAG1P78504 1218 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 SASS6Q6UVJ0 657 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 TTC6Q86TZ1 520 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 EDC3Q96F86 508 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 RIOK1Q9BRS2 568 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 WDR18Q9BV38 432 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 SCAND2PQ9GZW5 306 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 ASCC2Q9H1I8 757 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 PDCL3Q9H2J4 239 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 BOLA2Q9H3K6 86 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 PAG1Q9NWQ8 432 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 TCHHQ07283 1943 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GH2P01242 217 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GJB2P29033 226 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 IRX3P78415 501 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 FSD1Q9BTV5 496 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GINM1Q9NU53 330 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 USP25Q9UHP3 1055 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 GABRQQ9UN88 632 aa10.48□□□□□ -0.73
COL12A1-208ENST00000486533 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
COL12A1-208ENST00000486533 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 ATP5JP18859 108 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms