RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 DAGLBQ8NCG7 672 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 GPKOWQ92917 476 aaPredicted RBP eCLIP23.26■■□□□ 1.31
HPS3-206ENST00000486530 ZNF830Q96NB3 372 aaPredicted RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 OSBPL5Q9H0X9 879 aaPredicted RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 KLRF2D3W0D1 207 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 POLR2DO15514 142 aaKnown RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 SMARCA1P28370 1054 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 ATP2C1P98194 919 aaPredicted RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 SLC35G1Q2M3R5 365 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 GRIPAP1Q4V328 841 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 KANK3Q6NY19 840 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 CDC42EP5Q6NZY7 148 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.26■■□□□ 1.31
HPS3-206ENST00000486530 DRC7Q8IY82 874 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 SUPT20HQ8NEM7 779 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 MRIQ9BWK5 157 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 BARHL2Q9NY43 387 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 MTMR7Q9Y216 660 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 GREB1LQ9C091 1923 aaPredicted RBP23.25■■□□□ 1.31
HPS3-206ENST00000486530 SMTNL1A8MU46 457 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 CRKP46108 304 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 ZNF174Q15697 407 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 DACT2Q5SW24 774 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 WWC2Q6AWC2 1192 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 APOBEC3HQ6NTF7 200 aaKnown RBP23.25■■□□□ 1.31
HPS3-206ENST00000486530 ZDHHC15Q96MV8 337 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 SERPINB13Q9UIV8 391 aa23.25■■□□□ 1.31
HPS3-206ENST00000486530 WNT7AO00755 349 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 OFD1O75665 1012 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 TPM4P67936 248 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
HPS3-206ENST00000486530 CLIP2Q9UDT6 1046 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
HPS3-206ENST00000486530 IKBKBO14920 756 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 HLA-DOAP06340 250 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 POSTNQ15063 836 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 CCDC34Q96HJ3 373 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 MTMR4Q9NYA4 1195 aa23.24■■□□□ 1.31
HPS3-206ENST00000486530 M0R2N6 131 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 STXBP3O00186 592 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 GOLGA8HP0CJ92 632 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 HDLBPQ00341 1268 aaKnown RBP23.23■■□□□ 1.31
HPS3-206ENST00000486530 PTGDRQ13258 359 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 HEATR3Q7Z4Q2 680 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 RTKN2Q8IZC4 609 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 CCDC12Q8WUD4 166 aaPredicted RBP23.23■■□□□ 1.31
HPS3-206ENST00000486530 SERTAD1Q9UHV2 236 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 PCDHA5Q9Y5H7 936 aa23.23■■□□□ 1.31
HPS3-206ENST00000486530 IGKV6D-41A0A0C4DH26 115 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 ACTN4O43707 911 aaKnown RBP23.22■■□□□ 1.31
HPS3-206ENST00000486530 CCDC93Q567U6 631 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 TYW1BQ6NUM6 668 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 KCNF1Q9H3M0 494 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 KIF13BQ9NQT8 1826 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 AKR1B1P15121 316 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 NT5DC1Q5TFE4 455 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 MTFR1LQ9H019 292 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 EHD4Q9H223 541 aa23.22■■□□□ 1.31
HPS3-206ENST00000486530 MYH4Q9Y623 1939 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 SIPA1L1O43166 1804 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 PSME4Q14997 1843 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 CCDC194A0A1B0GVG4 234 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 PTGS1P23219 599 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 TGFB2P61812 414 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 USP17L2Q6R6M4 530 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 USP49Q70CQ1 688 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 FOXP4Q8IVH2 680 aaPredicted RBP23.21■■□□□ 1.31
HPS3-206ENST00000486530 SYMPKQ92797 1274 aaKnown RBP23.21■■□□□ 1.31
HPS3-206ENST00000486530 RRP36Q96EU6 259 aaKnown RBP23.21■■□□□ 1.31
HPS3-206ENST00000486530 PSMD1Q99460 953 aa23.21■■□□□ 1.31
HPS3-206ENST00000486530 PSDA5PKW4 1024 aaPredicted RBP23.2■■□□□ 1.3
HPS3-206ENST00000486530 ADAMTS3O15072 1205 aa23.2■■□□□ 1.3
HPS3-206ENST00000486530 PPIP5K2O43314 1243 aa23.2■■□□□ 1.3
HPS3-206ENST00000486530 ARL6IP4Q66PJ3 421 aaKnown RBP23.2■■□□□ 1.3
HPS3-206ENST00000486530 RASGRP2Q7LDG7 609 aa23.2■■□□□ 1.3
HPS3-206ENST00000486530 CCDC186Q7Z3E2 898 aa23.2■■□□□ 1.3
HPS3-206ENST00000486530 PDILTQ8N807 584 aa23.2■■□□□ 1.3
HPS3-206ENST00000486530 SEC63Q9UGP8 760 aaKnown RBP23.2■■□□□ 1.3
HPS3-206ENST00000486530 YDJCA8MPS7 323 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 FOXN1O15353 648 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 PDHBP11177 359 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 MCM7P33993 719 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 SHMT1P34896 483 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 NCAPHQ15003 741 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 ASPRV1Q53RT3 343 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 ISM2Q6H9L7 571 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 KIAA0825Q8IV33 1275 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 TRIML1Q8N9V2 468 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 PCDHA6Q9UN73 950 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 PCDHA8Q9Y5H6 950 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 VWA3AA6NCI4 1184 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 TTLL1O95922 423 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 POLD1P28340 1107 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 SMARCE1Q969G3 411 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 EPSTI1Q96J88 318 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 ZMYND12Q9H0C1 365 aa23.19■■□□□ 1.3
HPS3-206ENST00000486530 USP17L5A8MUK1 530 aa23.18■■□□□ 1.3
HPS3-206ENST00000486530 hCG_1984214I3L0E3 225 aa23.18■■□□□ 1.3
HPS3-206ENST00000486530 SARSP49591 514 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms