RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 FLOT1O75955 427 aa17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 ZNF792Q3KQV3 632 aa17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 PRDM5Q9NQX1 630 aaPredicted RBP17.27■□□□□ 0.36
SDCCAG3-211ENST00000486441 PGK2P07205 417 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 FCER1AP12319 257 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 CDK8P49336 464 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 PLS1Q14651 629 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 PANK1Q8TE04 598 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 TINF2Q9BSI4 451 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 SWAP70Q9UH65 585 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 ZNF214Q9UL59 606 aaPredicted RBP17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 MYO9BQ13459 2157 aa17.26■□□□□ 0.35
SDCCAG3-211ENST00000486441 KIAA0355O15063 1070 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 WDR46O15213 610 aaKnown RBP17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 ADAMTS4O75173 837 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 PGK1P00558 417 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 ADD2P35612 726 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 ICA1Q05084 483 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 MAFAQ8NHW3 353 aaPredicted RBP17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 BDP1A6H8Y1 2624 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 CHD7Q9P2D1 2997 aa17.25■□□□□ 0.35
SDCCAG3-211ENST00000486441 USP17L12C9JPN9 530 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 USP17L21D6R901 530 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 SLC25A27O95847 323 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 C16orf86Q6ZW13 317 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 LENG1Q96BZ8 264 aaPredicted RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 XPNPEP3Q9NQH7 507 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 SLC5A4Q9NY91 659 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 DIS3Q9Y2L1 958 aaKnown RBP17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 TACC3Q9Y6A5 838 aa17.24■□□□□ 0.35
SDCCAG3-211ENST00000486441 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 VWA5AO00534 786 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 MBD4O95243 580 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 COL11A1P12107 1806 aaPredicted RBP17.23■□□□□ 0.35
SDCCAG3-211ENST00000486441 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 A0A1W2PQ45 241 aaPredicted RBP17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 A0A1W2PQY0 241 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 SNAI1O95863 264 aaPredicted RBP17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 CLTBP09497 229 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 RARBP10826 455 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 STAT3P40763 770 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 MMP19Q99542 508 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
SDCCAG3-211ENST00000486441 GRIN2CQ14957 1233 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 ANKRD33Q7Z3H0 272 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 BOLA2Q9H3K6 86 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 PAG1Q9NWQ8 432 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
SDCCAG3-211ENST00000486441 DNAJC25-GNG10A0A024R161 153 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 APBB1O00213 710 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 ATP5JP18859 108 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 RNF180Q86T96 592 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 USP38Q8NB14 1042 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 FGD4Q96M96 766 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 TOX2Q96NM4 488 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
SDCCAG3-211ENST00000486441 PLXNA1Q9UIW2 1896 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 ADCY6O43306 1168 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 PQBP1O60828 265 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 CDK7P50613 346 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 ACLYP53396 1101 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 HAUS7Q99871 368 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 TBX21Q9UL17 535 aa17.19■□□□□ 0.34
SDCCAG3-211ENST00000486441 TMEM265A0A087WTH1 108 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms