RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 POTEEQ6S8J3 1075 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-208ENST00000486404 LRRC47Q8N1G4 583 aaKnown RBP15.29■□□□□ 0.04
CHMP3-208ENST00000486404 U2AF1L4Q8WU68 220 aaKnown RBP15.29■□□□□ 0.04
CHMP3-208ENST00000486404 SPATC1LQ9H0A9 340 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 CLIP2Q9UDT6 1046 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
CHMP3-208ENST00000486404 IGKV6D-41A0A0C4DH26 115 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 FOXP2O15409 715 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 GJA8P48165 433 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 TFAP4Q01664 338 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 MORN1Q5T089 497 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 TRIB2Q92519 343 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 SHISA4Q96DD7 197 aa15.28■□□□□ 0.04
CHMP3-208ENST00000486404 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
CHMP3-208ENST00000486404 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHMP3-208ENST00000486404 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-208ENST00000486404 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 NDUFB10O96000 172 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 HSPD1P10809 573 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 MAP2K5Q13163 448 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 ALX1Q15699 326 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 RRP12Q5JTH9 1297 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 CWC27Q6UX04 472 aaKnown RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 NCAPG2Q86XI2 1143 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 SHCBP1Q8NEM2 672 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 NUP88Q99567 741 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 SLF1Q9BQI6 1058 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 FBXO28Q9NVF7 368 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 MTMR4Q9NYA4 1195 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 PPP1R9AQ9ULJ8 1098 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 SYNPO2Q9UMS6 1093 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 STX8Q9UNK0 236 aa15.27■□□□□ 0.04
CHMP3-208ENST00000486404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
CHMP3-208ENST00000486404 F5H6K3 240 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-208ENST00000486404 ERCC3P19447 782 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 PTPREP23469 700 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 KLRC3Q07444 240 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 GRB14Q14449 540 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 PRPF38BQ5VTL8 546 aaKnown RBP15.26■□□□□ 0.03
CHMP3-208ENST00000486404 MROH8Q9H579 483 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 PAK6Q9NQU5 681 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-208ENST00000486404 ANAPC4Q9UJX5 808 aa15.26■□□□□ 0.03
CHMP3-208ENST00000486404 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 SGPL1O95470 568 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 SLC25A27O95847 323 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 FGAP02671 866 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 TFRCP02786 760 aaKnown RBP15.25■□□□□ 0.03
CHMP3-208ENST00000486404 PDE4AP27815 886 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 COPB2P35606 906 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 HAND2P61296 217 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 TRIM32Q13049 653 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
CHMP3-208ENST00000486404 MFSD14CQ5VZR4 134 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 GMCL1P1Q8NEA9 526 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 USP6NLQ92738 828 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 SLC5A4Q9NY91 659 aa15.25■□□□□ 0.03
CHMP3-208ENST00000486404 VWA5AO00534 786 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 STRNO43815 780 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 ORC4O43929 436 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 CAPN2P17655 700 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 ADORA2AP29274 412 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 TMEM132BQ14DG7 1078 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 CCL14Q16627 93 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 SLFN13Q68D06 897 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 DPP9Q86TI2 863 aa15.24■□□□□ 0.03
CHMP3-208ENST00000486404 RNF41Q9H4P4 317 aaPredicted RBP15.24■□□□□ 0.03
CHMP3-208ENST00000486404 ZBED4O75132 1171 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 FCER1AP12319 257 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 BMP3P12645 472 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 MKL1Q969V6 931 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 HTATIP2Q9BUP3 242 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 TEX13BQ9BXU2 312 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 FEM1BQ9UK73 627 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 MTMR7Q9Y216 660 aa15.23■□□□□ 0.03
CHMP3-208ENST00000486404 RAD50Q92878 1312 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 NMT2O60551 498 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 HOXC6P09630 235 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
CHMP3-208ENST00000486404 GSPT1P15170 499 aaKnown RBP15.22■□□□□ 0.03
CHMP3-208ENST00000486404 STAT3P40763 770 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 SLC1A4P43007 532 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 KCTD2Q14681 263 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 CCDC96Q2M329 555 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 AKNAD1Q5T1N1 836 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 SNRNP48Q6IEG0 339 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms