RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 AMOTL1Q8IY63 956 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 IFNL3Q8IZI9 196 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 NACAP1Q9BZK3 213 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 OSBPL5Q9H0X9 879 aaPredicted RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 MKRN1Q9UHC7 482 aaKnown RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 PAPPA2Q9BXP8 1791 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 OTOFQ9HC10 1997 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 RAD50Q92878 1312 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 THSD7BQ9C0I4 1608 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 USP17L12C9JPN9 530 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 USP17L21D6R901 530 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 ENTPD3O75355 529 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 HLA-DOAP06340 250 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 CTDSPL2Q05D32 466 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 MIGA2Q7L4E1 593 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 SH3BP5LQ7L8J4 393 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 CRACR2BQ8N4Y2 399 aaPredicted RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 ZC3H15Q8WU90 426 aaKnown RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 FAM151AQ8WW52 585 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 CDCA5Q96FF9 252 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 DYNLL2Q96FJ2 89 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 CSRNP1Q96S65 589 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 IDI2Q9BXS1 227 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 EPB41L4AQ9HCS5 686 aaPredicted RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 TOMM22Q9NS69 142 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 ATP8A2Q9NTI2 1148 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 NAV1Q8NEY1 1877 aa6.7□□□□□ -1.34
COPS3-208ENST00000486032 BAZ2AQ9UIF9 1905 aaKnown RBP6.7□□□□□ -1.34
COPS3-208ENST00000486032 CNTNAP1P78357 1384 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 CDK5RAP2Q96SN8 1893 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 ZNF213O14771 459 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 FOXP2O15409 715 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 PRDM1O75626 825 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 CELF2O95319 508 aaKnown RBP6.69□□□□□ -1.34
COPS3-208ENST00000486032 FGAP02671 866 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 NF2P35240 595 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 PLCD1P51178 756 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.69□□□□□ -1.34
COPS3-208ENST00000486032 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
COPS3-208ENST00000486032 CTR9Q6PD62 1173 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 TTC6Q86TZ1 520 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 FAM83AQ86UY5 434 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
COPS3-208ENST00000486032 INCENPQ9NQS7 918 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 ARPP21Q9UBL0 812 aaPredicted RBP6.69□□□□□ -1.34
COPS3-208ENST00000486032 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
COPS3-208ENST00000486032 RBM8AQ9Y5S9 174 aaKnown RBP6.69□□□□□ -1.34
COPS3-208ENST00000486032 MYH1P12882 1939 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 PITPNM2Q9BZ72 1349 aa6.69□□□□□ -1.34
COPS3-208ENST00000486032 AOC2O75106 756 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 REC8O95072 547 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 ZIC2O95409 532 aaPredicted RBP6.68□□□□□ -1.34
COPS3-208ENST00000486032 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
COPS3-208ENST00000486032 PTSQ03393 145 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 PPARAQ07869 468 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 IMMTQ16891 758 aaKnown RBP6.68□□□□□ -1.34
COPS3-208ENST00000486032 SUPT20HL1Q3ZLR7 823 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 C8orf34Q49A92 452 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 FKBP1CQ5VVH2 108 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 DCAF15Q66K64 600 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 CYP4F22Q6NT55 531 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 TICAM2Q86XR7 235 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 SLC44A5Q8NCS7 719 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 TEPSINQ96N21 525 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 DSCC1Q9BVC3 393 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 LSG1Q9H089 658 aaKnown RBP6.68□□□□□ -1.34
COPS3-208ENST00000486032 DHX36Q9H2U1 1008 aaKnown RBP6.68□□□□□ -1.34
COPS3-208ENST00000486032 MKNK2Q9HBH9 465 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 PI4KBQ9UBF8 816 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 CTNNA3Q9UI47 895 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 PPP2R3BQ9Y5P8 575 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 SIPA1L1O43166 1804 aa6.68□□□□□ -1.34
COPS3-208ENST00000486032 UBE2Q2LH0YL09 131 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 MPHOSPH10O00566 681 aaKnown RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 PPP1R12BO60237 982 aaPredicted RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 SLC3A2P08195 630 aaKnown RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 GRM1Q13255 1194 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 C12orf60Q5U649 245 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 CREB3L3Q68CJ9 461 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 ARMC9Q7Z3E5 817 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 BEND7Q8N7W2 519 aaPredicted RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 MAP4K1Q92918 833 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 KLRG1Q96E93 195 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 ZNF341Q9BYN7 854 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 ZFAND3Q9H8U3 227 aa6.67□□□□□ -1.34
COPS3-208ENST00000486032 GBA2Q9HCG7 927 aaPredicted RBP6.67□□□□□ -1.34
COPS3-208ENST00000486032 SERPINB13Q9UIV8 391 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms