RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 GRM1Q13255 1194 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
CTSA-208ENST00000485627 USP48Q86UV5 1035 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
CTSA-208ENST00000485627 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
CTSA-208ENST00000485627 HOOK2Q96ED9 719 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 LMBRD1Q9NUN5 540 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 MAD2L2Q9UI95 211 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 ISY1Q9ULR0 285 aaKnown RBP11.01□□□□□ -0.65
CTSA-208ENST00000485627 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
CTSA-208ENST00000485627 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
CTSA-208ENST00000485627 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
CTSA-208ENST00000485627 KLRF2D3W0D1 207 aa11□□□□□ -0.65
CTSA-208ENST00000485627 RAD21O60216 631 aa11□□□□□ -0.65
CTSA-208ENST00000485627 MBD3O95983 291 aa11□□□□□ -0.65
CTSA-208ENST00000485627 GH2P01242 217 aa11□□□□□ -0.65
CTSA-208ENST00000485627 SLURP2P0DP57 97 aa11□□□□□ -0.65
CTSA-208ENST00000485627 SCG2P13521 617 aa11□□□□□ -0.65
CTSA-208ENST00000485627 EEF2P13639 858 aaKnown RBP11□□□□□ -0.65
CTSA-208ENST00000485627 GUCY1A2P33402 732 aa11□□□□□ -0.65
CTSA-208ENST00000485627 FUT2Q10981 343 aa11□□□□□ -0.65
CTSA-208ENST00000485627 SEPT2Q15019 361 aa11□□□□□ -0.65
CTSA-208ENST00000485627 CCDC96Q2M329 555 aa11□□□□□ -0.65
CTSA-208ENST00000485627 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
CTSA-208ENST00000485627 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
CTSA-208ENST00000485627 PIBF1Q8WXW3 757 aa11□□□□□ -0.65
CTSA-208ENST00000485627 CHAMP1Q96JM3 812 aa11□□□□□ -0.65
CTSA-208ENST00000485627 SPATA32Q96LK8 384 aa11□□□□□ -0.65
CTSA-208ENST00000485627 GDPD2Q9HCC8 539 aa11□□□□□ -0.65
CTSA-208ENST00000485627 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
CTSA-208ENST00000485627 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
CTSA-208ENST00000485627 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CTSA-208ENST00000485627 hCG_1642624A0A1W2PR95 340 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 USP17L5A8MUK1 530 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 EGFRP00533 1210 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 MMP1P03956 469 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 PDHBP11177 359 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 SMARCA1P28370 1054 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 KIF23Q02241 960 aaPredicted RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 GSE1Q14687 1217 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 DEFB115Q30KQ5 88 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 GPATCH4Q5T3I0 446 aaKnown RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 DCAF15Q66K64 600 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 FAM173BQ6P4H8 233 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 MIGA2Q7L4E1 593 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 DCAF4Q8WV16 495 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 MKL1Q969V6 931 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 GJB4Q9NTQ9 266 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
CTSA-208ENST00000485627 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 ABT1Q9ULW3 272 aaKnown RBP10.99□□□□□ -0.65
CTSA-208ENST00000485627 MYH8P13535 1937 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 DICER1Q9UPY3 1922 aaKnown RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 KRT2P35908 639 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 EPS15P42566 896 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 SLC1A4P43007 532 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 NLRP5P59047 1200 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 UBE2HP62256 183 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 ZNF543Q08ER8 600 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 PKN1Q16512 942 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 ANGEL2Q5VTE6 544 aaKnown RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 SLFN13Q68D06 897 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 DIS3L2Q8IYB7 885 aaKnown RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 TRPM4Q8TD43 1214 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 CCDC12Q8WUD4 166 aaPredicted RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 FOXP1Q9H334 677 aaPredicted RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 SH2D4AQ9H788 454 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 VAT1LQ9HCJ6 419 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 SYNPO2Q9UMS6 1093 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
CTSA-208ENST00000485627 FRMPD2Q68DX3 1309 aaPredicted RBP10.98□□□□□ -0.65
CTSA-208ENST00000485627 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 ASNSP08243 561 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 SNHG28P0DPA3 235 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 CALML3P27482 149 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 CAP2P40123 477 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 RGS19P49795 217 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 MAP3K10Q02779 954 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 CEBPZQ03701 1054 aaKnown RBP10.97□□□□□ -0.65
CTSA-208ENST00000485627 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
CTSA-208ENST00000485627 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms