RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 OSBP2Q969R2 916 aa23.08■■□□□ 1.29
COL27A1-205ENST00000485397 ADAMTS5Q9UNA0 930 aa23.08■■□□□ 1.29
COL27A1-205ENST00000485397 DNM1LO00429 736 aa23.07■■□□□ 1.28
COL27A1-205ENST00000485397 RAD21O60216 631 aa23.07■■□□□ 1.28
COL27A1-205ENST00000485397 SLC5A4Q9NY91 659 aa23.07■■□□□ 1.28
COL27A1-205ENST00000485397 MINDY4BA8MYZ0 360 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 SLC25A27O95847 323 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 FCER1AP12319 257 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 LRIT3Q3SXY7 679 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 SBK1Q52WX2 424 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 FAM83BQ5T0W9 1011 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 APPBP2Q92624 585 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 MAML3Q96JK9 1138 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 GOPCQ9HD26 462 aa23.06■■□□□ 1.28
COL27A1-205ENST00000485397 RNF113AO15541 343 aaKnown RBP23.05■■□□□ 1.28
COL27A1-205ENST00000485397 SEPT4O43236 478 aa23.05■■□□□ 1.28
COL27A1-205ENST00000485397 RASA1P20936 1047 aa23.05■■□□□ 1.28
COL27A1-205ENST00000485397 RIOX2Q8IUF8 465 aa23.05■■□□□ 1.28
COL27A1-205ENST00000485397 GPATCH3Q96I76 525 aa23.05■■□□□ 1.28
COL27A1-205ENST00000485397 PPP1R9AQ9ULJ8 1098 aa23.05■■□□□ 1.28
COL27A1-205ENST00000485397 PARP14Q460N5 1801 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 VWA5AO00534 786 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 STAT3P40763 770 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 RTP1P59025 263 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 ARRDC4Q8NCT1 418 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 REPS2Q8NFH8 660 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 MMP19Q99542 508 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 NUP88Q99567 741 aaPredicted RBP23.04■■□□□ 1.28
COL27A1-205ENST00000485397 MKNK2Q9HBH9 465 aa23.04■■□□□ 1.28
COL27A1-205ENST00000485397 EPB41L4AQ9HCS5 686 aaPredicted RBP23.04■■□□□ 1.28
COL27A1-205ENST00000485397 GPAA1O43292 621 aa23.03■■□□□ 1.28
COL27A1-205ENST00000485397 MYCNP04198 464 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-205ENST00000485397 PGK2P07205 417 aa23.03■■□□□ 1.28
COL27A1-205ENST00000485397 GIMAP6Q6P9H5 292 aa23.03■■□□□ 1.28
COL27A1-205ENST00000485397 ZNF214Q9UL59 606 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-205ENST00000485397 M0R2C6 588 aa23.02■■□□□ 1.28
COL27A1-205ENST00000485397 Q7L0L9 218 aa23.02■■□□□ 1.28
COL27A1-205ENST00000485397 NYAP2Q9P242 653 aa23.02■■□□□ 1.28
COL27A1-205ENST00000485397 LAMA3Q16787 3333 aa23.02■■□□□ 1.28
COL27A1-205ENST00000485397 COL11A1P12107 1806 aaPredicted RBP23.01■■□□□ 1.27
COL27A1-205ENST00000485397 KBTBD13C9JR72 458 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 KCTD2Q14681 263 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 FAM47AQ5JRC9 791 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 GPR153Q6NV75 609 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 SLC39A5Q6ZMH5 540 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 ROBO3Q96MS0 1386 aa23.01■■□□□ 1.27
COL27A1-205ENST00000485397 GREB1LQ9C091 1923 aaPredicted RBP23■■□□□ 1.27
COL27A1-205ENST00000485397 F5H6K3 240 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 PRDM1O75626 825 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 NDUFB10O96000 172 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 APPP05067 770 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 ZFYP08048 801 aaPredicted RBP23■■□□□ 1.27
COL27A1-205ENST00000485397 TDO2P48775 406 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 KLRC3Q07444 240 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 ZNF792Q3KQV3 632 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 DEFB123Q8N688 67 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 LBHD1Q9BQE6 289 aaPredicted RBP23■■□□□ 1.27
COL27A1-205ENST00000485397 SLF1Q9BQI6 1058 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
COL27A1-205ENST00000485397 ZNFX1Q9P2E3 1918 aaKnown RBP23■■□□□ 1.27
COL27A1-205ENST00000485397 IGKV6D-41A0A0C4DH26 115 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 TAL1P17542 331 aaPredicted RBP22.99■■□□□ 1.27
COL27A1-205ENST00000485397 GNAT2P19087 354 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 ADCYAP1R1P41586 468 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 LRRC41Q15345 812 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 OTUD7AQ8TE49 926 aaPredicted RBP22.99■■□□□ 1.27
COL27A1-205ENST00000485397 SEC62Q99442 399 aaKnown RBP22.99■■□□□ 1.27
COL27A1-205ENST00000485397 TINF2Q9BSI4 451 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 CLIP2Q9UDT6 1046 aa22.99■■□□□ 1.27
COL27A1-205ENST00000485397 PATL2C9JE40 543 aaKnown RBP22.98■■□□□ 1.27
COL27A1-205ENST00000485397 IFNL3Q8IZI9 196 aa22.98■■□□□ 1.27
COL27A1-205ENST00000485397 ZNF444Q8N0Y2 327 aaPredicted RBP22.98■■□□□ 1.27
COL27A1-205ENST00000485397 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
COL27A1-205ENST00000485397 PRKAG2Q9UGJ0 569 aa22.98■■□□□ 1.27
COL27A1-205ENST00000485397 DIS3Q9Y2L1 958 aaKnown RBP22.98■■□□□ 1.27
COL27A1-205ENST00000485397 COPB2P35606 906 aa22.97■■□□□ 1.27
COL27A1-205ENST00000485397 TRIM60Q495X7 471 aa22.97■■□□□ 1.27
COL27A1-205ENST00000485397 NRBP1Q9UHY1 535 aa22.97■■□□□ 1.27
COL27A1-205ENST00000485397 RIPK3Q9Y572 518 aa22.97■■□□□ 1.27
COL27A1-205ENST00000485397 SLC4A3P48751 1232 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 SNRNP48Q6IEG0 339 aaKnown RBP22.96■■□□□ 1.27
COL27A1-205ENST00000485397 SLC17A8Q8NDX2 589 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 PI4K2BQ8TCG2 481 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 CEP95Q96GE4 821 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 TEX13BQ9BXU2 312 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 XPNPEP3Q9NQH7 507 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 TTC41PQ6P2S7 1318 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 SMCHD1A6NHR9 2005 aa22.96■■□□□ 1.27
COL27A1-205ENST00000485397 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
COL27A1-205ENST00000485397 RARBP10826 455 aa22.95■■□□□ 1.26
COL27A1-205ENST00000485397 SNX17Q15036 470 aa22.95■■□□□ 1.26
COL27A1-205ENST00000485397 CPXCR1Q8N123 301 aa22.95■■□□□ 1.26
COL27A1-205ENST00000485397 PRPF38AQ8NAV1 312 aaKnown RBP22.95■■□□□ 1.26
COL27A1-205ENST00000485397 PRDM5Q9NQX1 630 aaPredicted RBP22.95■■□□□ 1.26
COL27A1-205ENST00000485397 MTMR10Q9NXD2 777 aa22.95■■□□□ 1.26
COL27A1-205ENST00000485397 MTMR4Q9NYA4 1195 aa22.95■■□□□ 1.26
COL27A1-205ENST00000485397 ERC2O15083 957 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 PGK1P00558 417 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 LRRFIP1Q32MZ4 808 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms