RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PARP14Q460N5 1801 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 B4E1Z4 1266 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 PLA2G6O60733 806 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 KDM4AO75164 1064 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 FMNL1O95466 1100 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-213ENST00000485080 FAM83BQ5T0W9 1011 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 SLFN13Q68D06 897 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 ANO2Q9NQ90 1003 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 PPP1R9AQ9ULJ8 1098 aa20.95■□□□□ 0.94
SREBF1-213ENST00000485080 CCNA1P78396 465 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 TRDNQ13061 729 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 Q3C1V9 767 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 ABHD8Q96I13 439 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 BTBD7Q9P203 1132 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 FEM1BQ9UK73 627 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 A0A0G2JMZ2 1700 aa20.94■□□□□ 0.94
SREBF1-213ENST00000485080 E7EWF7 191 aa20.93■□□□□ 0.94
SREBF1-213ENST00000485080 BMP3P12645 472 aa20.93■□□□□ 0.94
SREBF1-213ENST00000485080 MAPK4P31152 587 aa20.93■□□□□ 0.94
SREBF1-213ENST00000485080 PRPF38AQ8NAV1 312 aaKnown RBP20.93■□□□□ 0.94
SREBF1-213ENST00000485080 ZSCAN10Q96SZ4 725 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-213ENST00000485080 SLF1Q9BQI6 1058 aa20.93■□□□□ 0.94
SREBF1-213ENST00000485080 FBXO28Q9NVF7 368 aa20.93■□□□□ 0.94
SREBF1-213ENST00000485080 ZSWIM8A7E2V4 1837 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 TNPO2O14787 897 aaKnown RBP20.92■□□□□ 0.94
SREBF1-213ENST00000485080 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
SREBF1-213ENST00000485080 DCAF4Q8WV16 495 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 COA7Q96BR5 231 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 ATG4CQ96DT6 458 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 NUP88Q99567 741 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-213ENST00000485080 PAGR1Q9BTK6 254 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 TAF6LQ9Y6J9 622 aa20.92■□□□□ 0.94
SREBF1-213ENST00000485080 VWA5AO00534 786 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 SLC27A2O14975 620 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 RAD21O60216 631 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 SNHG28P0DPA3 235 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 FDX1P10109 184 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 SLC1A4P43007 532 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 IRF5Q13568 498 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 TSGA10IPQ3SY00 556 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 CREB3L3Q68CJ9 461 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 ENAHQ8N8S7 591 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-213ENST00000485080 SHCBP1Q8NEM2 672 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 REPS2Q8NFH8 660 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 NCOA7Q8NI08 942 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 SPATC1LQ9H0A9 340 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 GJD2Q9UKL4 321 aa20.91■□□□□ 0.94
SREBF1-213ENST00000485080 ATP2A1O14983 1001 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 PEX10O60683 326 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 MCCP23508 829 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 MTA3Q9BTC8 594 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 PORCNQ9H237 461 aa20.9■□□□□ 0.94
SREBF1-213ENST00000485080 TNKSO95271 1327 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 STAT2P52630 851 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 PRKCZQ05513 592 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 TMEM132BQ14DG7 1078 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 SEC23AQ15436 765 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 CYB5R4Q7L1T6 521 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 RALYLQ86SE5 291 aaKnown RBP20.89■□□□□ 0.93
SREBF1-213ENST00000485080 MB21D2Q8IYB1 491 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-213ENST00000485080 ARMC5Q96C12 935 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 ZKSCAN3Q9BRR0 538 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 UBAC1Q9BSL1 405 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 ZNF214Q9UL59 606 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-213ENST00000485080 PTCH2Q9Y6C5 1203 aa20.89■□□□□ 0.93
SREBF1-213ENST00000485080 REC8O95072 547 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 PDHBP11177 359 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 FLT3LGP49771 235 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 PLEKHH3Q7Z736 793 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 SOCS4Q8WXH5 440 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 KCNB2Q92953 911 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 MOV10L1Q9BXT6 1211 aaKnown RBP20.88■□□□□ 0.93
SREBF1-213ENST00000485080 SLC38A10Q9HBR0 1119 aa20.88■□□□□ 0.93
SREBF1-213ENST00000485080 TMEM232C9JQI7 657 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 SLC25A27O95847 323 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 COPB2P35606 906 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 OAZ1P54368 228 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 GPR142Q7Z601 462 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 RIOX2Q8IUF8 465 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 CCAR1Q8IX12 1150 aaKnown RBP20.87■□□□□ 0.93
SREBF1-213ENST00000485080 PNMA1Q8ND90 353 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 PXYLP1Q8TE99 480 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 USP6NLQ92738 828 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 MROH8Q9H579 483 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
SREBF1-213ENST00000485080 KIAA0100Q14667 2235 aaKnown RBP20.86■□□□□ 0.93
SREBF1-213ENST00000485080 STRNO43815 780 aa20.86■□□□□ 0.93
SREBF1-213ENST00000485080 XRCC5P13010 732 aaKnown RBP20.86■□□□□ 0.93
SREBF1-213ENST00000485080 MORN1Q5T089 497 aa20.86■□□□□ 0.93
SREBF1-213ENST00000485080 RAET1EQ8TD07 263 aa20.86■□□□□ 0.93
SREBF1-213ENST00000485080 KAT14Q9H8E8 782 aa20.86■□□□□ 0.93
SREBF1-213ENST00000485080 BRCA2P51587 3418 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 SLC15A5A6NIM6 579 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms