RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 VCPKMTQ9H867 229 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
MACF1-220ENST00000485063 NYAP2Q9P242 653 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 ADGRA2Q96PE1 1338 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 PCNTO95613 3336 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 WDR46O15213 610 aaKnown RBP9.24□□□□□ -0.93
MACF1-220ENST00000485063 ORC4O43929 436 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
MACF1-220ENST00000485063 BCRP11274 1271 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 PSMC4P43686 418 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 PRMT2P55345 433 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 HERVK_113P62684 666 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 COG2Q14746 738 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 CLEC10AQ8IUN9 316 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 STAG1Q8WVM7 1258 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 ESR2Q92731 530 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 COA7Q96BR5 231 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 CEP95Q96GE4 821 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 P2RX7Q99572 595 aaKnown RBP9.24□□□□□ -0.93
MACF1-220ENST00000485063 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 SYNPO2Q9UMS6 1093 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 STX8Q9UNK0 236 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.24□□□□□ -0.93
MACF1-220ENST00000485063 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
MACF1-220ENST00000485063 TNPO2O14787 897 aaKnown RBP9.23□□□□□ -0.93
MACF1-220ENST00000485063 SGSM2O43147 1006 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 FGRP09769 529 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 CCNA1P78396 465 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 TRDNQ13061 729 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 CCDC178Q5BJE1 867 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 IQCA1Q86XH1 822 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 SIAH1Q8IUQ4 282 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 GPRC5AQ8NFJ5 357 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 MKL1Q969V6 931 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 ABHD8Q96I13 439 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 PAGR1Q9BTK6 254 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
MACF1-220ENST00000485063 KRT23Q9C075 422 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 CNNM2Q9H8M5 875 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 ISY1Q9ULR0 285 aaKnown RBP9.23□□□□□ -0.93
MACF1-220ENST00000485063 PTPN22Q9Y2R2 807 aa9.23□□□□□ -0.93
MACF1-220ENST00000485063 CTDP1Q9Y5B0 961 aaPredicted RBP9.23□□□□□ -0.93
MACF1-220ENST00000485063 IGKV6D-41A0A0C4DH26 115 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 F5H6K3 240 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 CDC45O75419 566 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 FLOT1O75955 427 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 ERVK-24P63145 666 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 KLRC3Q07444 240 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 NBPF11Q86T75 865 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 MB21D1Q8N884 522 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 RAET1EQ8TD07 263 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 TCP11L1Q9NUJ3 509 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 MORF4L1Q9UBU8 362 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 RABGAP1Q9Y3P9 1069 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 MYPNQ86TC9 1320 aa9.22□□□□□ -0.93
MACF1-220ENST00000485063 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.93
MACF1-220ENST00000485063 PARP14Q460N5 1801 aa9.21□□□□□ -0.93
MACF1-220ENST00000485063 CCDC85CA6NKD9 419 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 MAPK4P31152 587 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 IKQ13123 557 aaPredicted RBP9.21□□□□□ -0.94
MACF1-220ENST00000485063 FAM83BQ5T0W9 1011 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 LBX2Q6XYB7 198 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 RALYLQ86SE5 291 aaKnown RBP9.21□□□□□ -0.94
MACF1-220ENST00000485063 SKAP1Q86WV1 359 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 IFNLR1Q8IU57 520 aaPredicted RBP9.21□□□□□ -0.94
MACF1-220ENST00000485063 TBC1D10CQ8IV04 446 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 LRRC47Q8N1G4 583 aaKnown RBP9.21□□□□□ -0.94
MACF1-220ENST00000485063 GMCL1P1Q8NEA9 526 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 TTC14Q96N46 770 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 ESYT1Q9BSJ8 1104 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 ARHGAP39Q9C0H5 1083 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 SRRDQ9UH36 339 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
MACF1-220ENST00000485063 COL11A1P12107 1806 aaPredicted RBP9.2□□□□□ -0.94
MACF1-220ENST00000485063 ERICH2A1L162 156 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 SPDYE16A6NNV3 312 aaPredicted RBP9.2□□□□□ -0.94
MACF1-220ENST00000485063 B4E1Z4 1266 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 KDM4AO75164 1064 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 NDUFB10O96000 172 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 TOP1P11387 765 aaKnown RBP9.2□□□□□ -0.94
MACF1-220ENST00000485063 BMP3P12645 472 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 SLC1A4P43007 532 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 PTH1RQ03431 593 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 PLS1Q14651 629 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 SLC9C1Q4G0N8 1177 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 KIAA1755Q5JYT7 1200 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 IFFO2Q5TF58 517 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 WDR78Q5VTH9 848 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 PRPF38AQ8NAV1 312 aaKnown RBP9.2□□□□□ -0.94
MACF1-220ENST00000485063 CHURC1Q8WUH1 139 aa9.2□□□□□ -0.94
MACF1-220ENST00000485063 MAP4K1Q92918 833 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms