RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
CNKSR1-208ENST00000484874 RALYLQ86SE5 291 aaKnown RBP21.28■■□□□ 1
CNKSR1-208ENST00000484874 PRPF38AQ8NAV1 312 aaKnown RBP21.28■■□□□ 1
CNKSR1-208ENST00000484874 KCNB2Q92953 911 aa21.28■■□□□ 1
CNKSR1-208ENST00000484874 ZKSCAN3Q9BRR0 538 aa21.28■■□□□ 1
CNKSR1-208ENST00000484874 TXNRD2Q9NNW7 524 aa21.28■■□□□ 1
CNKSR1-208ENST00000484874 MCCP23508 829 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 HOXD10P28358 340 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 PRMT2P55345 433 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 FCGRTP55899 365 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 ERVK-9P63128 1117 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 ERVK-24P63145 666 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 Q3C1V9 767 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 ENAHQ8N8S7 591 aaPredicted RBP21.27■■□□□ 1
CNKSR1-208ENST00000484874 CHURC1Q8WUH1 139 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 DCAF4Q8WV16 495 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 PPP1R9AQ9ULJ8 1098 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 RLFQ13129 1914 aa21.27■■□□□ 1
CNKSR1-208ENST00000484874 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 CNMDO75829 334 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 FDX1P10109 184 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 CTGFP29279 349 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 SLC1A4P43007 532 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 SEC23AQ15436 765 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 MB21D2Q8IYB1 491 aaPredicted RBP21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 TRIM47Q96LD4 638 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 TRIM17Q9Y577 477 aa21.26■□□□□ 0.99
CNKSR1-208ENST00000484874 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 SNHG28P0DPA3 235 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 ZKSCAN1P17029 563 aaPredicted RBP21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 HSPA4P34932 840 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 CCNA1P78396 465 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 FAM160B2Q86V87 743 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 SLF1Q9BQI6 1058 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 ARHGAP39Q9C0H5 1083 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 FBXO28Q9NVF7 368 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 BTBD7Q9P203 1132 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 TNKSO95271 1327 aa21.25■□□□□ 0.99
CNKSR1-208ENST00000484874 VWA5AO00534 786 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 MAPK4P31152 587 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 MCM5P33992 734 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 KRT32Q14532 448 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 SART3Q15020 963 aaKnown RBP21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 FBXO46Q6PJ61 603 aaPredicted RBP21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 IGDCC4Q8TDY8 1250 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 ATG4CQ96DT6 458 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 PAGR1Q9BTK6 254 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 USP26Q9BXU7 913 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 MCOLN1Q9GZU1 580 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 KAT14Q9H8E8 782 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 PTPN22Q9Y2R2 807 aa21.24■□□□□ 0.99
CNKSR1-208ENST00000484874 ERICH2A1L162 156 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 TMEM232C9JQI7 657 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 IFIT3O14879 490 aaKnown RBP21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 PDHBP11177 359 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 STAT2P52630 851 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 IFIT1BQ5T764 474 aaKnown RBP21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 BTNL9Q6UXG8 535 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 TMTC2Q8N394 836 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 PNMA1Q8ND90 353 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 COA7Q96BR5 231 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 SRRDQ9UH36 339 aa21.23■□□□□ 0.99
CNKSR1-208ENST00000484874 ATP2A1O14983 1001 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 ANTXR2P58335 489 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 TNS4Q8IZW8 715 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 SHCBP1Q8NEM2 672 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 TMEM87BQ96K49 555 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 SPATC1LQ9H0A9 340 aa21.22■□□□□ 0.99
CNKSR1-208ENST00000484874 TNPO2O14787 897 aaKnown RBP21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 PEX10O60683 326 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 ZBED4O75132 1171 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 TMEM132BQ14DG7 1078 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 GPATCH4Q5T3I0 446 aaKnown RBP21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 KCTD1Q719H9 257 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 REPS2Q8NFH8 660 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 NEK1Q96PY6 1258 aa21.21■□□□□ 0.99
CNKSR1-208ENST00000484874 PARP14Q460N5 1801 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 SLC25A27O95847 323 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 ZNF543Q08ER8 600 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 WTAPQ15007 396 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 CCAR1Q8IX12 1150 aaKnown RBP21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 KIFC2Q96AC6 838 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 MOV10L1Q9BXT6 1211 aaKnown RBP21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 PORCNQ9H237 461 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 SLC38A10Q9HBR0 1119 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 GJD2Q9UKL4 321 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 ZNF214Q9UL59 606 aaPredicted RBP21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 WDR19Q8NEZ3 1342 aa21.2■□□□□ 0.98
CNKSR1-208ENST00000484874 PRC1O43663 620 aa21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 STRNO43815 780 aa21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 STAT3P40763 770 aa21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 OAZ1P54368 228 aa21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 EXOSC10Q01780 885 aaKnown RBP21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 TMEM67Q5HYA8 995 aa21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 DHX32Q7L7V1 743 aaKnown RBP21.19■□□□□ 0.98
CNKSR1-208ENST00000484874 CHST3Q7LGC8 479 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms