RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 ATP2B1P20020 1258 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 SMARCA1P28370 1054 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 CXCL9Q07325 125 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 ASPRV1Q53RT3 343 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
CTSA-207ENST00000484855 WWC2Q6AWC2 1192 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 CCDC148Q8NFR7 591 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 UPF1Q92900 1129 aaKnown RBP eCLIP19.19■□□□□ 0.663e-10■■■■■ 31.9
CTSA-207ENST00000484855 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 BCS1LQ9Y276 419 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 CLRN2A0PK11 232 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 NFKBIEO00221 500 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 CUTAO60888 179 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 ATP2B2Q01814 1243 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 TYRO3Q06418 890 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 TATDN1Q6P1N9 297 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
CTSA-207ENST00000484855 ZNF70Q9UC06 446 aaPredicted RBP19.18■□□□□ 0.66
CTSA-207ENST00000484855 FRMPD2Q68DX3 1309 aaPredicted RBP19.18■□□□□ 0.66
CTSA-207ENST00000484855 TCP10L2B9ZVM9 353 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 SNHG28P0DPA3 235 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 CIAPIN1Q6FI81 312 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
CTSA-207ENST00000484855 KRI1Q8N9T8 703 aaKnown RBP19.17■□□□□ 0.66
CTSA-207ENST00000484855 RRP36Q96EU6 259 aaKnown RBP19.17■□□□□ 0.66
CTSA-207ENST00000484855 CSRNP1Q96S65 589 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 BARHL2Q9NY43 387 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 TRIM75PA6NK02 468 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 STXBP3O00186 592 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 PFKFB1P16118 471 aa19.17■□□□□ 0.66
CTSA-207ENST00000484855 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
CTSA-207ENST00000484855 PTGER2P43116 358 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 TYW1BQ6NUM6 668 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 HOMER1Q86YM7 354 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 BLIDQ8IZY5 108 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 CLIC6Q96NY7 704 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 PCDHA4Q9UN74 947 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 CCDC173Q0VFZ6 552 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 NOM1Q5C9Z4 860 aaKnown RBP19.16■□□□□ 0.66
CTSA-207ENST00000484855 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
CTSA-207ENST00000484855 MTMR14Q8NCE2 650 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 UBA5Q9GZZ9 404 aa19.16■□□□□ 0.66
CTSA-207ENST00000484855 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
CTSA-207ENST00000484855 RESP18Q5W5W9 173 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 PIK3AP1Q6ZUJ8 805 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 TMEM179Q6ZVK1 233 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 KANSL2Q9H9L4 492 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 VAT1LQ9HCJ6 419 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 MRVI1Q9Y6F6 885 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 GDF11O95390 407 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 ZNF543Q08ER8 600 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 GALNT17Q6IS24 598 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
CTSA-207ENST00000484855 FAM151AQ8WW52 585 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 RIOX1Q9H6W3 641 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 VEZTQ9HBM0 779 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 GPCPD1Q9NPB8 672 aa19.15■□□□□ 0.66
CTSA-207ENST00000484855 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
CTSA-207ENST00000484855 ZNF202O95125 648 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 BMP15O95972 392 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 PTPREP23469 700 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 NAPAP54920 295 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 TNIP1Q15025 636 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 ABCB5Q2M3G0 1257 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 UVSSAQ2YD98 709 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 TTC38Q5R3I4 469 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 DAGLBQ8NCG7 672 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 PIGSQ96S52 555 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 SDF4Q9BRK5 362 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 HPSEQ9Y251 543 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
CTSA-207ENST00000484855 ADAMTS3O15072 1205 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 MYO1BO43795 1136 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 EEF2P13639 858 aaKnown RBP19.13■□□□□ 0.65
CTSA-207ENST00000484855 SYKP43405 635 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 TRAPPC10P48553 1259 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 CNTNAP1P78357 1384 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 ICA1Q05084 483 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 SEPT2Q15019 361 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 HERC5Q9UII4 1024 aaKnown RBP19.13■□□□□ 0.65
CTSA-207ENST00000484855 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
CTSA-207ENST00000484855 FAM237AA0A1B0GTK4 181 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 GPATCH4Q5T3I0 446 aaKnown RBP19.13■□□□□ 0.65
CTSA-207ENST00000484855 FKBP1CQ5VVH2 108 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 MKL1Q969V6 931 aa19.13■□□□□ 0.65
CTSA-207ENST00000484855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.13■□□□□ 0.65
CTSA-207ENST00000484855 SRPRBQ9Y5M8 271 aaKnown RBP19.13■□□□□ 0.65
CTSA-207ENST00000484855 WNT7AO00755 349 aa19.12■□□□□ 0.65
CTSA-207ENST00000484855 RASSF7Q02833 373 aa19.12■□□□□ 0.65
CTSA-207ENST00000484855 RBM26Q5T8P6 1007 aaKnown RBP19.12■□□□□ 0.65
CTSA-207ENST00000484855 hCG_1984214I3L0E3 225 aa19.12■□□□□ 0.65
CTSA-207ENST00000484855 M0R2N6 131 aa19.12■□□□□ 0.65
CTSA-207ENST00000484855 ANO6Q4KMQ2 910 aa19.12■□□□□ 0.65
CTSA-207ENST00000484855 ZNF713Q8N859 430 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms