RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 PALM3A6NDB9 673 aaPredicted RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 CCDC69A6NI79 296 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 IGF2BP3O00425 579 aaKnown RBP eCLIP7.51□□□□□ -1.21
NCL-209ENST00000484328 ST18O60284 1047 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 CALM1P0DP23 149 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 CALM2P0DP24 149 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 CALM3P0DP25 149 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 PDIA3P30101 505 aaKnown RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 TM4SF4P48230 202 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 MCM2P49736 904 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 INHBEP58166 350 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 HTRA3P83110 453 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 APOBRQ0VD83 1088 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 ST3GAL1Q11201 340 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 SREBF2Q12772 1141 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 CCL15Q16663 113 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 FAM83BQ5T0W9 1011 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 TREML2Q5T2D2 321 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 SLFN13Q68D06 897 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 BTNL9Q6UXG8 535 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 LBX2Q6XYB7 198 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 ANKRD23Q86SG2 305 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 MICU3Q86XE3 530 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 REM2Q8IYK8 340 aaPredicted RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 SPICE1Q8N0Z3 855 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 SNX21Q969T3 373 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 PTPN18Q99952 460 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 MYL10Q9BUA6 226 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 FAM217BQ9NTX9 383 aaPredicted RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 TMOD4Q9NZQ9 345 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 MAD2L2Q9UI95 211 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
NCL-209ENST00000484328 WDR33Q9C0J8 1336 aaKnown RBP7.51□□□□□ -1.21
NCL-209ENST00000484328 BTBD19C9JJ37 291 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 ZBTB43O43298 467 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 PFKFB2O60825 505 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 LARGE1O95461 756 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 PARP1P09874 1014 aaKnown RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 BMP3P12645 472 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 SMARCA1P28370 1054 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 CDC27P30260 824 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 MAP2K2P36507 400 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 SLC1A4P43007 532 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 VEGFBP49765 207 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 STAT2P52630 851 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 FGD1P98174 961 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 KIF23Q02241 960 aaPredicted RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 FUT2Q10981 343 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 MKRN3Q13064 507 aaKnown RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 PPP2R5BQ15173 497 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 ME3Q16798 604 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 SLC35G1Q2M3R5 365 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 NFXL1Q6ZNB6 911 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 GADL1Q6ZQY3 521 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 CATSPERGQ6ZRH7 1159 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 TMTC3Q6ZXV5 915 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 FAM43AQ8N2R8 423 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 CTCFLQ8NI51 663 aaPredicted RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 ZIC5Q96T25 663 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 CFHR5Q9BXR6 569 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 RPAP3Q9H6T3 665 aaPredicted RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 RBM28Q9NW13 759 aaKnown RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 ADAMTS5Q9UNA0 930 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 LIMCH1Q9UPQ0 1083 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 FRMPD2Q68DX3 1309 aaPredicted RBP7.5□□□□□ -1.21
NCL-209ENST00000484328 CNTNAP5Q8WYK1 1306 aa7.5□□□□□ -1.21
NCL-209ENST00000484328 MGAMO43451 1857 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 SPDYE16A6NNV3 312 aaPredicted RBP7.49□□□□□ -1.21
NCL-209ENST00000484328 GOLGA8AA7E2F4 631 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L15C9J2P7 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L13C9JLJ4 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L11C9JVI0 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 KLRF2D3W0D1 207 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L18D6R9N7 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L22D6RA61 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L17D6RBQ6 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L19D6RCP7 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L20D6RJB6 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 PDHXO00330 501 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 CYTH3O43739 400 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 AOC2O75106 756 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 RXRAP19793 462 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 KIF5BP33176 963 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 METAP2P50579 478 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCL-209ENST00000484328 USP17L24Q0WX57 530 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 SCRN1Q12765 414 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCL-209ENST00000484328 NTRK3Q16288 839 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 RTN1Q16799 776 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 CCDC96Q2M329 555 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 SYNE3Q6ZMZ3 975 aa7.49□□□□□ -1.21
NCL-209ENST00000484328 KCTD1Q719H9 257 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms