RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 NPY5RQ15761 445 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 C16orf86Q6ZW13 317 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 KRT27Q7Z3Y8 459 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SH3RF1Q7Z6J0 888 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 FLAD1Q8NFF5 587 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 NEDD1Q8NHV4 660 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SPATA20Q8TB22 786 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 TBC1D16Q8TBP0 767 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 ENOX1Q8TC92 643 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC12Q8WUD4 166 aaPredicted RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SHISA4Q96DD7 197 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 XPO4Q9C0E2 1151 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 COA1Q9GZY4 146 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 CSRNP2Q9H175 543 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 QTRT2Q9H974 415 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 IL17RBQ9NRM6 502 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 IFNKQ9P0W0 207 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SERTAD1Q9UHV2 236 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 MAN1B1Q9UKM7 699 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 TAOK2Q9UL54 1235 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 PCDHA4Q9UN74 947 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 PAXBP1Q9Y5B6 917 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 C10orf71Q711Q0 1435 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 MYH8P13535 1937 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 MYO3BQ8WXR4 1341 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 LAD1O00515 517 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 CCP110O43303 1012 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 NMT2O60551 498 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 SKILP12757 684 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 RASA1P20936 1047 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 HSPA1LP34931 641 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 NOVP48745 357 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 PLCD1P51178 756 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 CCZ1BP86790 482 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 CCZ1P86791 482 aaPredicted RBP8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 DDR1Q08345 913 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 LRMPQ12912 555 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 ORC2Q13416 577 aaPredicted RBP8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 MFSD14BQ5SR56 506 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 FILIP1Q7Z7B0 1213 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 FOXP4Q8IVH2 680 aaPredicted RBP8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 TEX11Q8IYF3 940 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 BLIDQ8IZY5 108 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 NLGN1Q8N2Q7 840 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 IQUBQ8NA54 791 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC112Q8NEF3 446 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 GSDMAQ96QA5 445 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 SPZ1Q9BXG8 430 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 MAD2L2Q9UI95 211 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 ATP6V0A2Q9Y487 856 aa8.41□□□□□ -1.06
SHROOM3-206ENST00000484236 FLT1P17948 1338 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 A0A087WWV3 80 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 hCG_1984214I3L0E3 225 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 PPEF1O14829 653 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 SERPINC1P01008 464 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 TOP1P11387 765 aaKnown RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 ALDH1B1P30837 517 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 LONP1P36776 959 aaKnown RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 TXLNAP40222 546 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 CDK8P49336 464 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 UBASH3AP57075 661 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 RHBDL3P58872 404 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 GRIN1Q05586 938 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 PTGDRQ13258 359 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 TXNRD1Q16881 649 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 IER5LQ5T953 404 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 C17orf53Q8N3J3 647 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 ZNF713Q8N859 430 aaPredicted RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 FBXW7Q969H0 707 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 DYNLL2Q96FJ2 89 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 PAGE5Q96GU1 130 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 EYA3Q99504 573 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 TMEM47Q9BQJ4 181 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 HSD3B7Q9H2F3 369 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 JAG2Q9Y219 1238 aa8.4□□□□□ -1.06
SHROOM3-206ENST00000484236 BAZ2BQ9UIF8 2168 aaKnown RBP8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 SNED1Q8TER0 1413 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 M0R2N6 131 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 PLSCR1O15162 318 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 MYL1P05976 194 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 TNNT1P13805 278 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms