RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 LHX8Q68G74 356 aa22.94■■□□□ 1.26
NDUFA3-213ENST00000484103 IFNL3Q8IZI9 196 aa22.94■■□□□ 1.26
NDUFA3-213ENST00000484103 ISY1Q9ULR0 285 aaKnown RBP22.94■■□□□ 1.26
NDUFA3-213ENST00000484103 PFASO15067 1338 aa22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 COBLO75128 1261 aa22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 LRRFIP1Q32MZ4 808 aaKnown RBP22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 ZNF444Q8N0Y2 327 aaPredicted RBP22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 MB21D1Q8N884 522 aa22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 TRPV1Q8NER1 839 aa22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 CLIP2Q9UDT6 1046 aa22.93■■□□□ 1.26
NDUFA3-213ENST00000484103 PATL2C9JE40 543 aaKnown RBP22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 FAM47AQ5JRC9 791 aa22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 GIMAP6Q6P9H5 292 aa22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 LRRC47Q8N1G4 583 aaKnown RBP22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 NAPBQ9H115 298 aa22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 COL11A1P12107 1806 aaPredicted RBP22.92■■□□□ 1.26
NDUFA3-213ENST00000484103 ROBO3Q96MS0 1386 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 PGK2P07205 417 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 HOXC6P09630 235 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 CAPN2P17655 700 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 PRAMEF19Q5SWL8 479 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 NACAP1Q9BZK3 213 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 DDX20Q9UHI6 824 aaKnown RBP22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 PARP14Q460N5 1801 aa22.91■■□□□ 1.26
NDUFA3-213ENST00000484103 NDUFB10O96000 172 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 ZMYM1Q5SVZ6 1142 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 SHCBP1Q8NEM2 672 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 CEP95Q96GE4 821 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 MMP19Q99542 508 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 MROH8Q9H579 483 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 PPP1R9AQ9ULJ8 1098 aa22.9■■□□□ 1.26
NDUFA3-213ENST00000484103 FRMPD3Q5JV73 1810 aa22.89■■□□□ 1.26
NDUFA3-213ENST00000484103 F5H6K3 240 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 VWA5AO00534 786 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 STRNO43815 780 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 FCER1AP12319 257 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 KLRC3Q07444 240 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 SENP6Q9GZR1 1112 aaPredicted RBP22.89■■□□□ 1.25
NDUFA3-213ENST00000484103 GREB1LQ9C091 1923 aaPredicted RBP22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 TSPY3P0CV98 308 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 TSPY8P0CW00 308 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 ATN1P54259 1190 aaPredicted RBP22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 CTDSPL2Q05D32 466 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 LRRC26Q2I0M4 334 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 KIFC2Q96AC6 838 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 LNPKQ9C0E8 428 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 INCENPQ9NQS7 918 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 NYAP2Q9P242 653 aa22.88■■□□□ 1.25
NDUFA3-213ENST00000484103 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 CYBAP13498 195 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 STAT3P40763 770 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 PPARAQ07869 468 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 GJC2Q5T442 439 aaPredicted RBP22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 CPXCR1Q8N123 301 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 SLF1Q9BQI6 1058 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 ZNF287Q9HBT7 754 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 SLC5A4Q9NY91 659 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 CTDP1Q9Y5B0 961 aaPredicted RBP22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 TRIOBPQ9H2D6 2365 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 ZNF236Q9UL36 1845 aa22.87■■□□□ 1.25
NDUFA3-213ENST00000484103 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 SLC25A27O95847 323 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 TFAP4Q01664 338 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 PDE4BQ07343 736 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 KCTD2Q14681 263 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 VPS53Q5VIR6 699 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 OLFML2BQ68BL8 750 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 MAML3Q96JK9 1138 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 MTMR7Q9Y216 660 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 MYH4Q9Y623 1939 aa22.86■■□□□ 1.25
NDUFA3-213ENST00000484103 IGKV6D-41A0A0C4DH26 115 aa22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 SLC3A2P08195 630 aaKnown RBP22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 SNRNP48Q6IEG0 339 aaKnown RBP22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 RIOX2Q8IUF8 465 aa22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 PRO3102Q9H379 93 aa22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 MTMR4Q9NYA4 1195 aa22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 ZNF214Q9UL59 606 aaPredicted RBP22.85■■□□□ 1.25
NDUFA3-213ENST00000484103 TRIM6-TRIM34B2RNG4 842 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 COL6A1P12109 1028 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 PDE1AP54750 535 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 HDAC1Q13547 482 aaPredicted RBP22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 REPS2Q8NFH8 660 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 EVI5LQ96CN4 794 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 FAM227BQ96M60 508 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 RAVER2Q9HCJ3 691 aaKnown RBP22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 ADAMTS5Q9UNA0 930 aa22.84■■□□□ 1.25
NDUFA3-213ENST00000484103 FOXP2O15409 715 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 MSCO60682 206 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 TTLL1O95922 423 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 MAGEA10P43363 369 aaPredicted RBP22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 IKQ13123 557 aaPredicted RBP22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 ABRAQ8N0Z2 381 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 RILPL2Q969X0 211 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 TOMM22Q9NS69 142 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 RIPK3Q9Y572 518 aa22.83■■□□□ 1.25
NDUFA3-213ENST00000484103 TSPY2A6NKD2 308 aa22.82■■□□□ 1.24
NDUFA3-213ENST00000484103 NMT2O60551 498 aa22.82■■□□□ 1.24
NDUFA3-213ENST00000484103 SLFN13Q68D06 897 aa22.82■■□□□ 1.24
NDUFA3-213ENST00000484103 HOMER2Q9NSB8 354 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms