RNA–Protein interactions for RNA: ENST00000483954.1

ATXN1-207, Transcript of ataxin 1, humanhuman

TSL 3

Gene ATXN1, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-207ENST00000483954 SPDYE3A6NKU9 549 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 SMTNL1A8MU46 457 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 GOLGA6L19H0YKK7 550 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 HIP1O00291 1037 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TM4SF5O14894 197 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 FSCN2O14926 492 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 CCP110O43303 1012 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 GSPT1P15170 499 aaKnown RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 ZKSCAN1P17029 563 aaPredicted RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 COL8A1P27658 744 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TPM4P67936 248 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 ZRSR1Q15695 479 aaKnown RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TMEM132EQ6IEE7 984 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 CEP85Q6P2H3 762 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 KLHL23Q8NBE8 558 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 CCDC112Q8NEF3 446 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 RILPL2Q969X0 211 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TMEM39AQ9NV64 488 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TTF2Q9UNY4 1162 aaKnown RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 LIMCH1Q9UPQ0 1083 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 RIMS2Q9UQ26 1411 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 AATKQ6ZMQ8 1374 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 NEXMIFQ5QGS0 1516 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 TULP4Q9NRJ4 1543 aa6.3□□□□□ -1.4
ATXN1-207ENST00000483954 RIMS1Q86UR5 1692 aaKnown RBP6.3□□□□□ -1.4
ATXN1-207ENST00000483954 CCDC171Q6TFL3 1326 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 A0A0A0MRY4 1105 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 ZNF853P0CG23 659 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 PSMA5P28066 241 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 ARL4DP49703 201 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 PDE1AP54750 535 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 KRT85P78386 507 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 PPP2R3AQ06190 1150 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 TEX35Q5T0J7 233 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN1-207ENST00000483954 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
ATXN1-207ENST00000483954 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 ARGLU1Q9NWB6 273 aaPredicted RBP6.29□□□□□ -1.4
ATXN1-207ENST00000483954 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
ATXN1-207ENST00000483954 STK26Q9P289 416 aa6.29□□□□□ -1.4
ATXN1-207ENST00000483954 EDC4Q6P2E9 1401 aaKnown RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 ENC1O14682 589 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 CTAGE5O15320 804 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 STX6O43752 255 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 DEAF1O75398 565 aaPredicted RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 ITGB2P05107 769 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 TPM1P09493 284 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 RAC1P63000 192 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 FANCCQ00597 558 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 IDI1Q13907 227 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 USP48Q86UV5 1035 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 FBXO11Q86XK2 927 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 FMR1NBQ8N0W7 255 aaPredicted RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 ZGPATQ8N5A5 531 aaKnown RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 PRAM1Q96QH2 718 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 CDK19Q9BWU1 502 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 SCAND2PQ9GZW5 306 aaPredicted RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 NAT10Q9H0A0 1025 aaKnown RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 DDX19AQ9NUU7 478 aaKnown RBP6.28□□□□□ -1.4
ATXN1-207ENST00000483954 CALCOCO1Q9P1Z2 691 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 PRDM4Q9UKN5 801 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 RTL1A6NKG5 1358 aa6.28□□□□□ -1.4
ATXN1-207ENST00000483954 ADAMTSL3P82987 1691 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 KRBA1A5PL33 1030 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 TCF3P15923 654 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 ZNF76P36508 570 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 KCNJ4P48050 445 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 CBX1P83916 185 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 GPS2Q13227 327 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 TPD52L1Q16890 204 aaPredicted RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 PLA2G4EQ3MJ16 856 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 CCDC30Q5VVM6 783 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 TXNDC11Q6PKC3 985 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 ALYREFQ86V81 257 aaKnown RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 ERC1Q8IUD2 1116 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 SIRT2Q8IXJ6 389 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 KRT222Q8N1A0 295 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 IL17RAQ96F46 866 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 RSRP1Q9BUV0 290 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 NUP62CLQ9H1M0 184 aa6.27□□□□□ -1.41
ATXN1-207ENST00000483954 GPN3Q9UHW5 284 aaPredicted RBP6.27□□□□□ -1.41
ATXN1-207ENST00000483954 TTC21BQ7Z4L5 1316 aa6.26□□□□□ -1.41
ATXN1-207ENST00000483954 YTHDC2Q9H6S0 1430 aaKnown RBP6.26□□□□□ -1.41
ATXN1-207ENST00000483954 DLC1Q96QB1 1528 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms