RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PLXNB2O15031 1838 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 CENPFP49454 3210 aa31.26■■■□□ 2.6
GTF3C4-202ENST00000483873 PPP4R3BQ5MIZ7 849 aa31.26■■■□□ 2.6
GTF3C4-202ENST00000483873 ANO2Q9NQ90 1003 aa31.26■■■□□ 2.6
GTF3C4-202ENST00000483873 PTCH2Q9Y6C5 1203 aa31.26■■■□□ 2.6
GTF3C4-202ENST00000483873 GNRH1P01148 92 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 SLFN13Q68D06 897 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 CASC1Q6TDU7 716 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 RASGRP2Q7LDG7 609 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 HOXC10Q9NYD6 342 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 SRRDQ9UH36 339 aa31.25■■■□□ 2.59
GTF3C4-202ENST00000483873 TNPO2O14787 897 aaKnown RBP31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 RCSD1Q6JBY9 416 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 PORCNQ9H237 461 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 GABRQQ9UN88 632 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 MYPNQ86TC9 1320 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 PRKCZQ05513 592 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 KRT23Q9C075 422 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 ZSWIM5Q9P217 1185 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 MTMR7Q9Y216 660 aa31.24■■■□□ 2.59
GTF3C4-202ENST00000483873 CCDC85CA6NKD9 419 aa31.23■■■□□ 2.59
GTF3C4-202ENST00000483873 STOX1Q6ZVD7 989 aa31.23■■■□□ 2.59
GTF3C4-202ENST00000483873 TMEM47Q9BQJ4 181 aa31.23■■■□□ 2.59
GTF3C4-202ENST00000483873 CNNM2Q9H8M5 875 aa31.23■■■□□ 2.59
GTF3C4-202ENST00000483873 PPP1R9AQ9ULJ8 1098 aa31.23■■■□□ 2.59
GTF3C4-202ENST00000483873 E7EWF7 191 aa31.21■■■□□ 2.59
GTF3C4-202ENST00000483873 TOP1P11387 765 aaKnown RBP31.21■■■□□ 2.59
GTF3C4-202ENST00000483873 BMP3P12645 472 aa31.21■■■□□ 2.59
GTF3C4-202ENST00000483873 MCCP23508 829 aa31.21■■■□□ 2.59
GTF3C4-202ENST00000483873 HOXD10P28358 340 aa31.21■■■□□ 2.59
GTF3C4-202ENST00000483873 NT5C2P49902 561 aa31.2■■■□□ 2.59
GTF3C4-202ENST00000483873 PRMT2P55345 433 aa31.2■■■□□ 2.59
GTF3C4-202ENST00000483873 CYB5R4Q7L1T6 521 aa31.2■■■□□ 2.59
GTF3C4-202ENST00000483873 GMCL1Q96IK5 515 aa31.2■■■□□ 2.59
GTF3C4-202ENST00000483873 SLF1Q9BQI6 1058 aa31.2■■■□□ 2.59
GTF3C4-202ENST00000483873 IQCA1Q86XH1 822 aa31.19■■■□□ 2.58
GTF3C4-202ENST00000483873 COA7Q96BR5 231 aa31.19■■■□□ 2.58
GTF3C4-202ENST00000483873 ISY1Q9ULR0 285 aaKnown RBP31.19■■■□□ 2.58
GTF3C4-202ENST00000483873 ADAMTS5Q9UNA0 930 aa31.19■■■□□ 2.58
GTF3C4-202ENST00000483873 SLC27A2O14975 620 aa31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 SLC1A4P43007 532 aa31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 FLT3LGP49771 235 aa31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 MB21D1Q8N884 522 aa31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 TTC14Q96N46 770 aa31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 ZSCAN10Q96SZ4 725 aaPredicted RBP31.18■■■□□ 2.58
GTF3C4-202ENST00000483873 TRDNQ13061 729 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 TMEM132BQ14DG7 1078 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 NECTIN1Q15223 517 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 KCTD1Q719H9 257 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 MOV10L1Q9BXT6 1211 aaKnown RBP31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 SPATC1LQ9H0A9 340 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 TNKSO95271 1327 aa31.17■■■□□ 2.58
GTF3C4-202ENST00000483873 VWA5AO00534 786 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 MAPK4P31152 587 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 CCNA1P78396 465 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 PLS1Q14651 629 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 CREB3L3Q68CJ9 461 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 CCAR1Q8IX12 1150 aaKnown RBP31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 ENAHQ8N8S7 591 aaPredicted RBP31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 REPS2Q8NFH8 660 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 RAET1EQ8TD07 263 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 KIFC2Q96AC6 838 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 FEM1BQ9UK73 627 aa31.16■■■□□ 2.58
GTF3C4-202ENST00000483873 TMEM232C9JQI7 657 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 GPR142Q7Z601 462 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 DGKHQ86XP1 1220 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 GJD2Q9UKL4 321 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 CCDC96Q2M329 555 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 WDR78Q5VTH9 848 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 RALYLQ86SE5 291 aaKnown RBP31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 PRPF38AQ8NAV1 312 aaKnown RBP31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 NCOA7Q8NI08 942 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 SH3TC2Q8TF17 1288 aa31.15■■■□□ 2.58
GTF3C4-202ENST00000483873 SLC9C1Q4G0N8 1177 aa31.14■■■□□ 2.58
GTF3C4-202ENST00000483873 CCDC178Q5BJE1 867 aa31.14■■■□□ 2.58
GTF3C4-202ENST00000483873 DCAF4Q8WV16 495 aa31.14■■■□□ 2.58
GTF3C4-202ENST00000483873 UBAC1Q9BSL1 405 aa31.14■■■□□ 2.58
GTF3C4-202ENST00000483873 STAT2P52630 851 aa31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 COL9A3Q14050 684 aaPredicted RBP31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 PLEKHH3Q7Z736 793 aa31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 ANKS1AQ92625 1134 aa31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 CWC22Q9HCG8 908 aaKnown RBP31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 ZNF214Q9UL59 606 aaPredicted RBP31.13■■■□□ 2.57
GTF3C4-202ENST00000483873 FRMPD2Q68DX3 1309 aaPredicted RBP31.12■■■□□ 2.57
GTF3C4-202ENST00000483873 PDHBP11177 359 aa31.12■■■□□ 2.57
GTF3C4-202ENST00000483873 IKQ13123 557 aaPredicted RBP31.12■■■□□ 2.57
GTF3C4-202ENST00000483873 CHST3Q7LGC8 479 aa31.12■■■□□ 2.57
GTF3C4-202ENST00000483873 MB21D2Q8IYB1 491 aaPredicted RBP31.12■■■□□ 2.57
GTF3C4-202ENST00000483873 ERCC3P19447 782 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 ANTXR2P58335 489 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 SEC23AQ15436 765 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 TTBK2Q6IQ55 1244 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 PNMA1Q8ND90 353 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 ARMC5Q96C12 935 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 KAT14Q9H8E8 782 aa31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 ZNFX1Q9P2E3 1918 aaKnown RBP31.11■■■□□ 2.57
GTF3C4-202ENST00000483873 IRF5Q13568 498 aa31.1■■■□□ 2.57
GTF3C4-202ENST00000483873 FAM160B2Q86V87 743 aa31.1■■■□□ 2.57
GTF3C4-202ENST00000483873 GPCPD1Q9NPB8 672 aa31.1■■■□□ 2.57
GTF3C4-202ENST00000483873 ADCY3O60266 1144 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms