RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CCDC8Q9H0W5 538 aaPredicted RBP13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 FLOT1O75955 427 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 ZNF865P0CJ78 1059 aaPredicted RBP13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 TMEM132BQ14DG7 1078 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 ATXN2LQ8WWM7 1075 aaKnown RBP13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 THEGQ9P2T0 379 aa13.23□□□□□ -0.29
SMARCC1-205ENST00000483847 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 BCAR3O75815 825 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 TIMP1P01033 207 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 CYP2D6P10635 497 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 PLA2G5P39877 138 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 ACLYP53396 1101 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 CCDC85BQ15834 202 aaPredicted RBP13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 TOX2Q96NM4 488 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 GAS2L1Q99501 681 aaPredicted RBP13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 MMP19Q99542 508 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
SMARCC1-205ENST00000483847 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 DCDC2CA8MYV0 355 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 MAP3K12Q12852 859 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 AKNAD1Q5T1N1 836 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 STARD7Q9NQZ5 370 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
SMARCC1-205ENST00000483847 MYO9BQ13459 2157 aa13.21□□□□□ -0.3
SMARCC1-205ENST00000483847 XIRP2A4UGR9 3374 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 MYH8P13535 1937 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 MAGEB6P1A0A0J9YX57 407 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 MYADML2A6NDP7 307 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 SMIM22K7EJ46 135 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 ACRP10323 421 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 AKR1A1P14550 325 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 AKR1B1P15121 316 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 KCTD2Q14681 263 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 TMEM179Q6ZVK1 233 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 RIOX2Q8IUF8 465 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 DYNLL2Q96FJ2 89 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 UHRF1Q96T88 793 aaPredicted RBP13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 VCPKMTQ9H867 229 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 ADAMTS5Q9UNA0 930 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 GBF1Q92538 1859 aa13.2□□□□□ -0.3
SMARCC1-205ENST00000483847 SLC25A27O95847 323 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 CSF2RAP15509 400 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 KCNA10Q16322 511 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 KLHDC9Q8NEP7 349 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 TRANK1O15050 2925 aa13.19□□□□□ -0.3
SMARCC1-205ENST00000483847 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 ADCY6O43306 1168 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 SNAI1O95863 264 aaPredicted RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 IGFBP4P22692 258 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 CDK7P50613 346 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 ICA1Q05084 483 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.34e-9■□□□□ 9
SMARCC1-205ENST00000483847 ZNF365Q70YC5 407 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 FAM122AQ96E09 287 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 CRNKL1Q9BZJ0 848 aaKnown RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 DCP1AQ9NPI6 582 aaPredicted RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
SMARCC1-205ENST00000483847 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 MOXD2PA6NHM9 499 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 VWA5AO00534 786 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 IPO8O15397 1037 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms