RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 USP17L18D6R9N7 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L22D6RA61 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L17D6RBQ6 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L19D6RCP7 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L20D6RJB6 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 FLOT1O75955 427 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 GOLGA8HP0CJ92 632 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 BMP3P12645 472 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 RXRAP19793 462 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 MAP2K1Q02750 393 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L24Q0WX57 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 PABPC4Q13310 644 aaKnown RBP eCLIP20.87■□□□□ 0.934e-7■■■□□ 15.8
CPNE1-224ENST00000483359 NUP133Q8WUM0 1156 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 LARP6Q9BRS8 491 aaKnown RBP20.87■□□□□ 0.93
CPNE1-224ENST00000483359 PDRG1Q9NUG6 133 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 RNF186Q9NXI6 227 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 LIFRP42702 1097 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 IKQ13123 557 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-224ENST00000483359 CATIPQ7Z7H3 387 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 ZNF654Q8IZM8 581 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 SMCR8Q8TEV9 937 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-224ENST00000483359 GMCL1Q96IK5 515 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 BEGAINQ9BUH8 593 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 GPCPD1Q9NPB8 672 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 HOXA7P31268 230 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-224ENST00000483359 NEK4P51957 841 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 APOBRQ0VD83 1088 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 CRHR2Q13324 411 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 CATSPERGQ6ZRH7 1159 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 IL17RAQ96F46 866 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 PARK7Q99497 189 aaKnown RBP20.86■□□□□ 0.93
CPNE1-224ENST00000483359 TSKSQ9UJT2 592 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 PNMA3Q9UL41 463 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 SLC12A7Q9Y666 1083 aa20.86■□□□□ 0.93
CPNE1-224ENST00000483359 TMEM232C9JQI7 657 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 TBC1D8O95759 1140 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 OSBPP22059 807 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 DCAF4Q8WV16 495 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 BRPF3Q9ULD4 1205 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 KLF18A0A0U1RQI7 1052 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 ALDH1A1P00352 501 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 TOB2Q14106 344 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-224ENST00000483359 NOL8Q76FK4 1167 aaKnown RBP20.85■□□□□ 0.93
CPNE1-224ENST00000483359 TMTC2Q8N394 836 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 P2RX7Q99572 595 aaKnown RBP20.85■□□□□ 0.93
CPNE1-224ENST00000483359 SLC45A1Q9Y2W3 748 aa20.85■□□□□ 0.93
CPNE1-224ENST00000483359 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 TROAPQ12815 778 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 TTBK2Q6IQ55 1244 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 SGMS1Q86VZ5 419 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 CPVLQ9H3G5 476 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 R3HDMLQ9H3Y0 253 aa20.84■□□□□ 0.93
CPNE1-224ENST00000483359 PEX10O60683 326 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 SNHG28P0DPA3 235 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 SLC16A2P36021 539 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 HERVK_113P62684 666 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 ZNF543Q08ER8 600 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 KIFC2Q96AC6 838 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 ZFYVE28Q9HCC9 887 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.93
CPNE1-224ENST00000483359 WBP1LQ9NX94 342 aa20.83■□□□□ 0.93
CPNE1-224ENST00000483359 SPDYE16A6NNV3 312 aaPredicted RBP20.83■□□□□ 0.92
CPNE1-224ENST00000483359 CA12O43570 354 aa20.83■□□□□ 0.92
CPNE1-224ENST00000483359 PARP1P09874 1014 aaKnown RBP20.83■□□□□ 0.92
CPNE1-224ENST00000483359 STAT2P52630 851 aa20.83■□□□□ 0.92
CPNE1-224ENST00000483359 APOA5Q6Q788 366 aa20.83■□□□□ 0.92
CPNE1-224ENST00000483359 STAG2Q8N3U4 1231 aa20.83■□□□□ 0.92
CPNE1-224ENST00000483359 ATG4CQ96DT6 458 aa20.83■□□□□ 0.92
CPNE1-224ENST00000483359 GOLGA8BA8MQT2 603 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 DDAH1O94760 285 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 AK2P54819 239 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 COG2Q14746 738 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 SYNE3Q6ZMZ3 975 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 SLF1Q9BQI6 1058 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 AGXT2Q9BYV1 514 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 CPA4Q9UI42 421 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 RLFQ13129 1914 aa20.82■□□□□ 0.92
CPNE1-224ENST00000483359 PAGR1Q9BTK6 254 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 MAD2L2Q9UI95 211 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 FEM1BQ9UK73 627 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 ZBTB43O43298 467 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-224ENST00000483359 GRM4Q14833 912 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 ANKRD13CQ8N6S4 541 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 CTCFLQ8NI51 663 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-224ENST00000483359 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 PPP1R9AQ9ULJ8 1098 aa20.81■□□□□ 0.92
CPNE1-224ENST00000483359 TLR2O60603 784 aa20.8■□□□□ 0.92
CPNE1-224ENST00000483359 DSG3P32926 999 aa20.8■□□□□ 0.92
CPNE1-224ENST00000483359 ASPRV1Q53RT3 343 aa20.8■□□□□ 0.92
CPNE1-224ENST00000483359 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
CPNE1-224ENST00000483359 FBXL16Q8N461 479 aa20.8■□□□□ 0.92
CPNE1-224ENST00000483359 SNAP25P60880 206 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 RABEP1Q15276 862 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 POTEEQ6S8J3 1075 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 ADGRA2Q96PE1 1338 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms