RNA–Protein interactions for RNA: ENST00000483098.5

RBSN-208, Transcript of rabenosyn, RAB effector, human

TSL 4

Gene RBSN, Length 532 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBSN-208	ENST00000483098	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.22	□□□□□ -0.61
RBSN-208	ENST00000483098	RNPC3	Q96LT9	517 aa	Known RBP	11.22	□□□□□ -0.61
RBSN-208	ENST00000483098	MROH8	Q9H579	483 aa		11.22	□□□□□ -0.61
RBSN-208	ENST00000483098	KIAA0355	O15063	1070 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	CLTB	P09497	229 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	ADORA2A	P29274	412 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	COG2	Q14746	738 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	TRIM60	Q495X7	471 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	CERKL	Q49MI3	558 aa	Predicted RBP	11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	CCDC174	Q6PII3	467 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	TRPV1	Q8NER1	839 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	TOX2	Q96NM4	488 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	MEIS3	Q99687	375 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	BTBD7	Q9P203	1132 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	PHF24	Q9UPV7	400 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	TTC28	Q96AY4	2481 aa		11.21	□□□□□ -0.61
RBSN-208	ENST00000483098	COL11A1	P12107	1806 aa	Predicted RBP	11.21	□□□□□ -0.62
RBSN-208	ENST00000483098		K7ELQ4	463 aa	Predicted RBP	11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	TRAK2	O60296	914 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	RAG1	P15918	1043 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	LRRC41	Q15345	812 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	ABCB5	Q2M3G0	1257 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	AKNAD1	Q5T1N1	836 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	TTC22	Q5TAA0	569 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	RNF180	Q86T96	592 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	PLEKHM2	Q8IWE5	1019 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	GBP4	Q96PP9	640 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	SPATC1L	Q9H0A9	340 aa		11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	DIS3	Q9Y2L1	958 aa	Known RBP	11.2	□□□□□ -0.62
RBSN-208	ENST00000483098	MROH7	Q68CQ1	1323 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	TRIM43B	A6NCK2	446 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	GOLGA6L3	A6NEY3	463 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	SLC25A27	O95847	323 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	RARB	P10826	455 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	DNAJB2	P25686	324 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	ADCYAP1R1	P41586	468 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	USP5	P45974	858 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	TLE2	Q04725	743 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	FPGS	Q05932	587 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	RABEP1	Q15276	862 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	GAS2L1	Q99501	681 aa	Predicted RBP	11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	TSEN34	Q9BSV6	310 aa	Known RBP	11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	ZNF576	Q9H609	170 aa		11.19	□□□□□ -0.62
RBSN-208	ENST00000483098	GNAI2	P04899	355 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	CYP2E1	P05181	493 aa	Predicted RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	GSPT1	P15170	499 aa	Known RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	ERCC3	P19447	782 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	MRE11	P49959	708 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	ZYX	Q15942	572 aa	Known RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	CEP85	Q6P2H3	762 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	ANKRD33	Q7Z3H0	272 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	ADGRA1	Q86SQ6	560 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	NUP133	Q8WUM0	1156 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	MAML3	Q96JK9	1138 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	SH2D4A	Q9H788	454 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	NDUFB9	Q9Y6M9	179 aa		11.18	□□□□□ -0.62
RBSN-208	ENST00000483098	MOXD2P	A6NHM9	499 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	DCDC2C	A8MYV0	355 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	FCER1A	P12319	257 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	COPB2	P35606	906 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	PLA2G5	P39877	138 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	GRIN2C	Q14957	1233 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	SH3RF1	Q7Z6J0	888 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	MSL3	Q8N5Y2	521 aa	Known RBP	11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	OSBPL3	Q9H4L5	887 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	C1orf115	Q9H7X2	142 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	XPNPEP3	Q9NQH7	507 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	THEG	Q9P2T0	379 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	SAP30BP	Q9UHR5	308 aa	Known RBP	11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.17	□□□□□ -0.62
RBSN-208	ENST00000483098	GBF1	Q92538	1859 aa		11.17	□□□□□ -0.62
RBSN-208	ENST00000483098		A0A1W2PQ45	241 aa	Predicted RBP	11.16	□□□□□ -0.62
RBSN-208	ENST00000483098		A0A1W2PQY0	241 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	COBL	O75128	1261 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	AKR1A1	P14550	325 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	CYP7A1	P22680	504 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	SHMT1	P34896	483 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	PPIG	Q13427	754 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TNNI3K	Q59H18	835 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	FAM47A	Q5JRC9	791 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	SLC44A5	Q8NCS7	719 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	ACER1	Q8TDN7	264 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TNPO1	Q92973	898 aa	Known RBP	11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TIFA	Q96CG3	184 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	ASB2	Q96Q27	587 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TMEM39A	Q9NV64	488 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	FPGT-TNNI3K	V9GXZ4	949 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	NCOR1	O75376	2440 aa		11.16	□□□□□ -0.62
RBSN-208	ENST00000483098	TIMP1	P01033	207 aa		11.15	□□□□□ -0.62
RBSN-208	ENST00000483098	XRCC6	P12956	609 aa	Known RBP eCLIP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms