RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 RBM10P98175 930 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 HNRNPUQ00839 825 aaKnown RBP eCLIP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 OCRLQ01968 901 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 GRB10Q13322 594 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 SV2CQ496J9 727 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 KIAA1211LQ6NV74 962 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 PKN3Q6P5Z2 889 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 CATIPQ7Z7H3 387 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 KIF18BQ86Y91 864 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 ZNF295-AS1Q8N0V1 137 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 GALNT6Q8NCL4 622 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 NAXEQ8NCW5 288 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 EHBP1Q8NDI1 1231 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 SNIP1Q8TAD8 396 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 HPS1Q92902 700 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 CLUHP3Q96NS8 147 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 FAM204AQ9H8W3 233 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 NMRK2Q9NPI5 230 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 FAM50BQ9Y247 325 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 FCF1Q9Y324 198 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 TNKSO95271 1327 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 K7ESF4 209 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 APAF1O14727 1248 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 ULK1O75385 1050 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 SRGNP10124 158 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 SDSP20132 328 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 GABREP78334 506 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 NUCB1Q02818 461 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 KIF22Q14807 665 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 FAM209AQ5JX71 171 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 CFAP161Q6P656 301 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 PNMA8AQ86V59 439 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 RASSF3Q86WH2 238 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 CREBRFQ8IUR6 639 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 TPH2Q8IWU9 490 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 SUGP1Q8IWZ8 645 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 CLASRPQ8N2M8 674 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 CPA6Q8N4T0 437 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 NKAPQ8N5F7 415 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 NGDNQ8NEJ9 315 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 UNC45AQ9H3U1 944 aa6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 SAP30BPQ9UHR5 308 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-216ENST00000483065 UPK3BL1B0FP48 263 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 UPK3BL2E5RIL1 263 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 J3QL48 77 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 K7ENM7 598 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 MEN1O00255 615 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 PMM2O15305 246 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 PIP5K1CO60331 668 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 LTFP02788 710 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 MYBL2P10244 700 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 RBP3P10745 1247 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 FGFR1P11362 822 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 BPIP17213 487 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 NAT1P18440 290 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 NME2P22392 152 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 PLA2G4AP47712 749 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 TERF1P54274 439 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 PEAR1Q5VY43 1037 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 TSHZ3Q63HK5 1081 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 LLGL2Q6P1M3 1020 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 RUFY4Q6ZNE9 571 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 C11orf74Q86VG3 221 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 NCAPG2Q86XI2 1143 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 FAM43AQ8N2R8 423 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 GIMAP8Q8ND71 665 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 DDX54Q8TDD1 881 aaKnown RBP6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 FUBP3Q96I24 572 aaKnown RBP eCLIP6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 DHRS1Q96LJ7 313 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 TCF12Q99081 682 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 ISCA1Q9BUE6 129 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 ARFGAP3Q9NP61 516 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 GMIPQ9P107 970 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
R3HDM1-216ENST00000483065 KPNA6O60684 536 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 ADH1CP00326 375 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 ZKSCAN1P17029 563 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 SERPINB3P29508 390 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 GPC1P35052 558 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 GRM3Q14832 879 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 ALDH1L2Q3SY69 923 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 CCDC92Q53HC0 331 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 NSMFQ6X4W1 530 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 UNC5AQ6ZN44 842 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 GET4Q7L5D6 327 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 RPGRQ92834 1020 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 HSPBAP1Q96EW2 488 aa6.13□□□□□ -1.43
R3HDM1-216ENST00000483065 PPM1MQ96MI6 270 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms