RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 CEP85Q6P2H3 762 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 LCORLQ8N3X6 602 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 DNAJC2Q99543 621 aaKnown RBP8.93□□□□□ -0.98
CSDE1-206ENST00000483030 VCPKMTQ9H867 229 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 PHF24Q9UPV7 400 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 TMX2Q9Y320 296 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 CYP2D7A0A087X1C5 515 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 TCRBV5S4A2TA0A5A2 114 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 SMIM22K7EJ46 135 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 APBB1O00213 710 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 PRKAB2O43741 272 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 SLC25A27O95847 323 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 RARBP10826 455 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-206ENST00000483030 EPHB4P54760 987 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 ICA1Q05084 483 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 RHPN1Q8TCX5 695 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 CCDC17Q96LX7 622 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 MMP19Q99542 508 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 TINF2Q9BSI4 451 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 SH2D4AQ9H788 454 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 ARMT1Q9H993 441 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 XPNPEP3Q9NQH7 507 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 FBXO28Q9NVF7 368 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 SWAP70Q9UH65 585 aa8.92□□□□□ -0.98
CSDE1-206ENST00000483030 MAST2Q6P0Q8 1798 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 USP17L21D6R901 530 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 KIAA0355O15063 1070 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 WDR46O15213 610 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 RAD21O60216 631 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 PQBP1O60828 265 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 CLTBP09497 229 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 EEF2P13639 858 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 FOSL2P15408 326 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 RAG1P15918 1043 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 STAT3P40763 770 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 CDK8P49336 464 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 ZNF792Q3KQV3 632 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 HSP90AB4PQ58FF6 505 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 C12orf60Q5U649 245 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 RNF180Q86T96 592 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 RIOX2Q8IUF8 465 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 CLASRPQ8N2M8 674 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 ATP8A2Q9NTI2 1148 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 NRBP1Q9UHY1 535 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 ADAMTS5Q9UNA0 930 aa8.91□□□□□ -0.98
CSDE1-206ENST00000483030 DIS3Q9Y2L1 958 aaKnown RBP8.91□□□□□ -0.98
CSDE1-206ENST00000483030 A0A1W2PQ45 241 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-206ENST00000483030 A0A1W2PQY0 241 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 VWA5AO00534 786 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 MBD4O95243 580 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 IFIT2P09913 472 aaKnown RBP8.9□□□□□ -0.98
CSDE1-206ENST00000483030 ZNF865P0CJ78 1059 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-206ENST00000483030 KCTD2Q14681 263 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSDE1-206ENST00000483030 LENG1Q96BZ8 264 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-206ENST00000483030 KANSL2Q9H9L4 492 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 UNC80Q8N2C7 3258 aa8.9□□□□□ -0.98
CSDE1-206ENST00000483030 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-206ENST00000483030 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-206ENST00000483030 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 PITPNM1O00562 1244 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 EIF5BO60841 1220 aaKnown RBP8.89□□□□□ -0.99
CSDE1-206ENST00000483030 CHGBP05060 677 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 AKR1A1P14550 325 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 FPGSQ05932 587 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 FAAP100Q0VG06 881 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 GRIN2CQ14957 1233 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 FAM83BQ5T0W9 1011 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 AMOTL1Q8IY63 956 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
CSDE1-206ENST00000483030 BOLA2Q9H3K6 86 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 PRDM6Q9NQX0 595 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 STARD7Q9NQZ5 370 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 PAG1Q9NWQ8 432 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 PPP1R9AQ9ULJ8 1098 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 CNPY2Q9Y2B0 182 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 DNAH12Q6ZR08 3092 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 CDK5RAP2Q96SN8 1893 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 MYO5AQ9Y4I1 1855 aaKnown RBP8.89□□□□□ -0.99
CSDE1-206ENST00000483030 FOCADQ5VW36 1801 aa8.89□□□□□ -0.99
CSDE1-206ENST00000483030 MYH1P12882 1939 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ADAMTS4O75173 837 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 SNAI1O95863 264 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-206ENST00000483030 DNAJB2P25686 324 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 COPB2P35606 906 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ADD2P35612 726 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ACLYP53396 1101 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 KCNA10Q16322 511 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms