RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
CCDC78-213ENST00000482878 PNPLA7Q6ZV29 1317 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 SYNRGQ9UMZ2 1314 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 COBLO75128 1261 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 HNRNPH1P31943 449 aaKnown RBP13.98□□□□□ -0.17
CCDC78-213ENST00000482878 PPARAQ07869 468 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 PKN1Q16512 942 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 UBAC1Q9BSL1 405 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 EBAG9O00559 213 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 GNAT2P19087 354 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 CDKAL1Q5VV42 579 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 ADGRA1Q86SQ6 560 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 TNKSO95271 1327 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 STRCP1A6NGW2 1772 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 RNF40O75150 1001 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 SEC23AQ15436 765 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 STAMQ92783 540 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 PNKPQ96T60 521 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 RNF26Q9BY78 433 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-213ENST00000482878 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 CASP14P31944 242 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 AKAP17AQ02040 695 aaKnown RBP13.97□□□□□ -0.17
CCDC78-213ENST00000482878 DPYDQ12882 1025 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 LRCH2Q5VUJ6 765 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 C8orf37Q96NL8 207 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 GBP3Q9H0R5 595 aa13.97□□□□□ -0.17
CCDC78-213ENST00000482878 MFAP3LO75121 409 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 ZNF34Q8IZ26 560 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 KAT2BQ92831 832 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
CCDC78-213ENST00000482878 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
CCDC78-213ENST00000482878 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC78-213ENST00000482878 RCAN1P53805 252 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 GSCP56915 257 aaPredicted RBP13.96□□□□□ -0.17
CCDC78-213ENST00000482878 FUT2Q10981 343 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 DDB1Q16531 1140 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 NGLY1Q96IV0 654 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
CCDC78-213ENST00000482878 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 ABL1P00519 1130 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 GYPCP04921 128 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 KRT2P35908 639 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 MTA3Q9BTC8 594 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 MED4Q9NPJ6 270 aa13.96□□□□□ -0.18
CCDC78-213ENST00000482878 V9GY48 417 aaPredicted RBP13.96□□□□□ -0.18
CCDC78-213ENST00000482878 KIF5CO60282 957 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 SCP2P22307 547 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 INPP5BP32019 993 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ZNF174Q15697 407 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 SUSD4Q5VX71 490 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CEP112Q8N8E3 955 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-213ENST00000482878 NAA15Q9BXJ9 866 aaKnown RBP13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CENPHQ9H3R5 247 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC78-213ENST00000482878 SLIT2O94813 1529 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CYP7A1P22680 504 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CCT6AP40227 531 aaKnown RBP13.95□□□□□ -0.18
CCDC78-213ENST00000482878 VSNL1P62760 191 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ANKZF1Q9H8Y5 726 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 FAM169AQ9Y6X4 670 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ACRBPQ8NEB7 543 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 ESR2Q92731 530 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CDC23Q9UJX2 597 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 L1RE1Q9UN81 338 aa13.95□□□□□ -0.18
CCDC78-213ENST00000482878 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CPP00450 1065 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 XBP1P17861 261 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 BLZF1Q9H2G9 400 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CTNND2Q9UQB3 1225 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CAPN7Q9Y6W3 813 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 LRP5O75197 1615 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 SOS2Q07890 1332 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CDC25AP30304 524 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
CCDC78-213ENST00000482878 RNF225M0QZC1 329 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-213ENST00000482878 NPY5RQ15761 445 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
CCDC78-213ENST00000482878 XDHP47989 1333 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 ECM2O94769 699 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-213ENST00000482878 FILIP1LQ4L180 1135 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms