RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 HOXC10Q9NYD6 342 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 PNMA3Q9UL41 463 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 FDX1P10109 184 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 PDHBP11177 359 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 VCAM1P19320 739 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 OSBPP22059 807 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 SMARCA1P28370 1054 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 KIF5BP33176 963 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 GNAQP50148 359 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 ASPRV1Q53RT3 343 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 GPAT2Q6NUI2 795 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 CATSPERGQ6ZRH7 1159 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 ZNF654Q8IZM8 581 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
CCM2-215ENST00000482714 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
CCM2-215ENST00000482714 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
CCM2-215ENST00000482714 COG2Q14746 738 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
CCM2-215ENST00000482714 FAM160B2Q86V87 743 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 IFNL1Q8IU54 200 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 PTPN18Q99952 460 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 LZTS2Q9BRK4 669 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
CCM2-215ENST00000482714 MYPNQ86TC9 1320 aa17.91■□□□□ 0.46
CCM2-215ENST00000482714 CCDC196A0A1B0GTZ2 297 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 BTBD19C9JJ37 291 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 ZBTB43O43298 467 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 PARP1P09874 1014 aaKnown RBP17.9■□□□□ 0.46
CCM2-215ENST00000482714 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 SPICE1Q8N0Z3 855 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 FANCBQ8NB91 859 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 CTCFLQ8NI51 663 aaPredicted RBP17.9■□□□□ 0.46
CCM2-215ENST00000482714 GTF3C2Q8WUA4 911 aaPredicted RBP17.9■□□□□ 0.46
CCM2-215ENST00000482714 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
CCM2-215ENST00000482714 SENP2Q9HC62 589 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 MYH4Q9Y623 1939 aa17.9■□□□□ 0.46
CCM2-215ENST00000482714 KLF18A0A0U1RQI7 1052 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
CCM2-215ENST00000482714 RAD21O60216 631 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 AK2P54819 239 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 MAP2K1Q02750 393 aaPredicted RBP17.89■□□□□ 0.45
CCM2-215ENST00000482714 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 GRM1Q13255 1194 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 GRM4Q14833 912 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
CCM2-215ENST00000482714 ZSCAN31Q96LW9 406 aaPredicted RBP17.89■□□□□ 0.45
CCM2-215ENST00000482714 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
CCM2-215ENST00000482714 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
CCM2-215ENST00000482714 PDHXO00330 501 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 AOC2O75106 756 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 STAT2P52630 851 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 FAM83BQ5T0W9 1011 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 TREML2Q5T2D2 321 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 CFHR5Q9BXR6 569 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 PDIA3P30101 505 aaKnown RBP17.88■□□□□ 0.45
CCM2-215ENST00000482714 DSG3P32926 999 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 IRX3P78415 501 aaPredicted RBP17.88■□□□□ 0.45
CCM2-215ENST00000482714 APOBRQ0VD83 1088 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 NUP133Q8WUM0 1156 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 ZIC5Q96T25 663 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 PARK7Q99497 189 aaKnown RBP17.88■□□□□ 0.45
CCM2-215ENST00000482714 ADAMTS5Q9UNA0 930 aa17.88■□□□□ 0.45
CCM2-215ENST00000482714 PTPRFP10586 1907 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 TMEM232C9JQI7 657 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 KLRF2D3W0D1 207 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCM2-215ENST00000482714 DHX16O60231 1041 aaKnown RBP17.87■□□□□ 0.45
CCM2-215ENST00000482714 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
CCM2-215ENST00000482714 FAM43AQ8N2R8 423 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 MB21D1Q8N884 522 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 TANGO6Q9C0B7 1094 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 MAD2L2Q9UI95 211 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 PNMA2Q9UL42 364 aa17.87■□□□□ 0.45
CCM2-215ENST00000482714 CA12O43570 354 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 FLOT1O75955 427 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 DGKZQ13574 1117 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 CCDC96Q2M329 555 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 KCTD1Q719H9 257 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 P2RX7Q99572 595 aaKnown RBP17.86■□□□□ 0.45
CCM2-215ENST00000482714 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
CCM2-215ENST00000482714 ZFYVE28Q9HCC9 887 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 SH2B1Q9NRF2 756 aaPredicted RBP17.86■□□□□ 0.45
CCM2-215ENST00000482714 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 NID2Q14112 1375 aa17.86■□□□□ 0.45
CCM2-215ENST00000482714 METAP2P50579 478 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCM2-215ENST00000482714 RTN1Q16799 776 aa17.85■□□□□ 0.45
CCM2-215ENST00000482714 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
CCM2-215ENST00000482714 SAGE1Q9NXZ1 904 aa17.85■□□□□ 0.45
CCM2-215ENST00000482714 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
CCM2-215ENST00000482714 MTMR7Q9Y216 660 aa17.85■□□□□ 0.45
CCM2-215ENST00000482714 PFKFB2O60825 505 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 TRAF1Q13077 416 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms