RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 GMCL1P1Q8NEA9 526 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 SHCBP1Q8NEM2 672 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 MOV10L1Q9BXT6 1211 aaKnown RBP15.46■□□□□ 0.07
HDAC1-207ENST00000481281 SPATC1LQ9H0A9 340 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 IL25Q9H293 177 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 IL17RBQ9NRM6 502 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 BIN2Q9UBW5 565 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-207ENST00000481281 PPP1R9AQ9ULJ8 1098 aa15.46■□□□□ 0.07
HDAC1-207ENST00000481281 BRCA2P51587 3418 aa15.46■□□□□ 0.06
HDAC1-207ENST00000481281 RAD21O60216 631 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 HMGCRP04035 888 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 PCP11498 1178 aaKnown RBP15.45■□□□□ 0.06
HDAC1-207ENST00000481281 NOVP48745 357 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 HAND2P61296 217 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 TBC1D10CQ8IV04 446 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
HDAC1-207ENST00000481281 TRIB2Q92519 343 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 NUP88Q99567 741 aaPredicted RBP15.45■□□□□ 0.06
HDAC1-207ENST00000481281 DSCC1Q9BVC3 393 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 UNC93B1Q9H1C4 597 aa15.45■□□□□ 0.06
HDAC1-207ENST00000481281 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
HDAC1-207ENST00000481281 RAD50Q92878 1312 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 SLC15A5A6NIM6 579 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
HDAC1-207ENST00000481281 GJB1P08034 283 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 CYP2B6P20813 491 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 PTPREP23469 700 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 RGS2P41220 211 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 MAP2K5Q13163 448 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 GRB14Q14449 540 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-207ENST00000481281 STAG1Q8WVM7 1258 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 SHISA4Q96DD7 197 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 APBA2Q99767 749 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
HDAC1-207ENST00000481281 PDE4DIPQ5VU43 2346 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 VWA5AO00534 786 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 NMT2O60551 498 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 HOXC6P09630 235 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 GJA8P48165 433 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 TMEM132BQ14DG7 1078 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 TRMT44Q8IYL2 757 aaKnown RBP15.43■□□□□ 0.06
HDAC1-207ENST00000481281 REPS2Q8NFH8 660 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 SLF1Q9BQI6 1058 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
HDAC1-207ENST00000481281 PAK6Q9NQU5 681 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-207ENST00000481281 ZNF214Q9UL59 606 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-207ENST00000481281 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 IVNS1ABPQ9Y6Y0 642 aa15.43■□□□□ 0.06
HDAC1-207ENST00000481281 ERCC3P19447 782 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 CHMLP26374 656 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 TRIM32Q13049 653 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 MAP3K21Q5TCX8 1036 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-207ENST00000481281 MFSD6Q6ZSS7 791 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 PRPF38AQ8NAV1 312 aaKnown RBP15.42■□□□□ 0.06
HDAC1-207ENST00000481281 GMCL1Q96IK5 515 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-207ENST00000481281 MROH8Q9H579 483 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 TOMM22Q9NS69 142 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 TCP11L1Q9NUJ3 509 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 NEDD4P46934 1319 aa15.42■□□□□ 0.06
HDAC1-207ENST00000481281 ZNF213O14771 459 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 STRNO43815 780 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
HDAC1-207ENST00000481281 NT5C2P49902 561 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 PLS1Q14651 629 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 CCL14Q16627 93 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
HDAC1-207ENST00000481281 RIOX2Q8IUF8 465 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 U2AF1L4Q8WU68 220 aaKnown RBP15.41■□□□□ 0.06
HDAC1-207ENST00000481281 RUFY2Q8WXA3 655 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC1-207ENST00000481281 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
HDAC1-207ENST00000481281 RPTORQ8N122 1335 aa15.41■□□□□ 0.06
HDAC1-207ENST00000481281 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 SLC25A27O95847 323 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 IGHA2P01877 340 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 BMP3P12645 472 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 NCAPG2Q86XI2 1143 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 ABRAQ8N0Z2 381 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 CTNNA3Q9UI47 895 aa15.4■□□□□ 0.06
HDAC1-207ENST00000481281 SGPL1O95470 568 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
HDAC1-207ENST00000481281 CAPN2P17655 700 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 ADORA2AP29274 412 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 COPB2P35606 906 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 STAT3P40763 770 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 SLC1A4P43007 532 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
HDAC1-207ENST00000481281 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 UBE2Q1Q7Z7E8 422 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
HDAC1-207ENST00000481281 ESR2Q92731 530 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms